Oryx dammah (scimitar-horned oryx): 120853227 Help Entry 120853227         CDS       T07255                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism oda  Oryx dammah (scimitar-horned oryx) Pathway oda04015   Rap1 signaling pathway oda04115   p53 signaling pathway oda04145   Phagosome oda04148   Efferocytosis oda04151   PI3K-Akt signaling pathway oda04350   TGF-beta signaling pathway oda04510   Focal adhesion oda04512   ECM-receptor interaction oda04820   Cytoskeleton in muscle cells oda05144   Malaria oda05165   Human papillomavirus infection oda05205   Proteoglycans in cancer oda05206   MicroRNAs in cancer oda05219   Bladder cancer Brite KEGG Orthology (KO) [BR:oda00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     120853227 (THBS1)    04350 TGF-beta signaling pathway     120853227 (THBS1)    04151 PI3K-Akt signaling pathway     120853227 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120853227 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120853227 (THBS1)    04148 Efferocytosis     120853227 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     120853227 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     120853227 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120853227 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     120853227 (THBS1)    05205 Proteoglycans in cancer     120853227 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     120853227 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     120853227 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     120853227 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oda04131]     120853227 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oda00536]     120853227 (THBS1) Membrane trafficking [BR:oda04131]  Endocytosis   Phagocytosis    Opsonins     120853227 (THBS1) Glycosaminoglycan binding proteins [BR:oda00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120853227 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C cEGF EGF_3 TSP1_ADAMTS Laminin_G_3 EGF_CA TSP1_CCN Laminin_G_2 EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  120853227 NCBI-ProteinID:  XP_040082895 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MGLAWGLGVLLLLHACGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDKKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDHFQGVLQNVRFVFGTTPEDILRNKGCSSSATSVF LTLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIR KVTEENKELANELRRPPLCYHNGVQYRTGDEWTVDSCTECRCQNSVTICKKVSCPIMPCS NATVPDGECCPRCWPASDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSV QTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKA RETKACQKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTEN QICNKQDCPIDGCLSNPCFAGVQCTSYPDGSWKCGACPPGYSGDGVNCKDVDECKEVPDA CFNHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCN KNAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLLCVANATYHCRKDNC PNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDEVGDRCDNCP YNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPL EHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDD DNDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDICPENVDISETDFR RFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPI YDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcggtgtcctgctcctgttgcatgcctgcggctccaaccgc attccagaatctgggggagacaacagtgtgttcgacatctttgaactcactggagctgcc cgcaagggctctgggcgccgactagtgaagggtcctgacccttctagcccagctttccgc atcgaggatgccaacctgatcccccctgtgcctgataagaagttccaagacctagtggat gctgtgcgggcggagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc cgaggtaccctgctggctgtggagcggaaagaccactctggccaggtcttcagcgtggtc tccaatggcaaagcgggcaccctggacctgagcctgaccgtgcagggcaagcagcacgtg gtgtcggtggaggaagcactgctggcaactggccagtggaagagcatcaccctgtttgtg caggaggacagggcccagctgtacattgactgtgagaagatggagaatgcggagctggat gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcattgcc aaaggaggtgtcaatgaccatttccagggggtgctgcagaatgtaaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctcagctaccagtgtcttt ctcacccttgacaacaacgtggtgaatgggtccagccctgccatccgcaccgactacatt ggccacaagacaaaagacctgcaagccatttgtggcatctcatgtgatgagctgtccagc atggtcctagagctcagaggtctacgcaccattgtgaccacactgcaggacagtatccgt aaagtgaccgaagagaacaaagagctggccaatgagctgaggaggcccccactctgctac cacaacggagtccagtacaggactggtgacgagtggacggtggacagctgcaccgagtgt cgctgccagaactcagttaccatctgcaaaaaagtgtcctgtcccatcatgccctgctcc aacgccacagttcccgatggagaatgctgcccacggtgctggccagccagcgactctgca gacgatggctggtccccgtggtctgagtggacctcttgctctgtgacctgtggcaatgga atccagcagcgtggccgctcctgcgacagcctcaacaacagatgcgagggctcctctgtg cagacgcggacctgccacatccaggagtgtgacaagagatttaaacaggatggcggctgg agccactggtccccgtggtcatcttgttccgtcacatgtggagatggtgtgatcacaagg atccggctctgcaactcccccagcccccagatgaatgggaagccatgtgagggcaaagcc cgggagaccaaagcctgccagaaagacgcctgccccatcaatggaggctggggaccctgg tcaccatgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctc tgcaacaaccccacaccccagtttggaggcaaggactgcgttggtgatgtaacagaaaac cagatctgcaacaagcaggactgtcccattgatggatgcctgtccaatccctgctttgct ggtgtccagtgtaccagctaccctgatggcagctggaagtgtggtgcttgtcccccaggc tatagtggagacggcgtcaactgcaaagatgttgatgagtgcaaagaagtccctgatgcc tgcttcaaccacaatggagagcacaggtgtgagaacacagatcccggctacaactgcctg ccctgcccaccgcgcttcactggctcgcagcccttcggccggggcgtggaacatgccacc gccaacaaacaggtatgcaagccccgaaacccctgcacagacgggacacacgactgcaac aagaacgccaagtgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgt aagcctggctacgccggcaacggcatcatctgcggggaggacacagacctggacggctgg cccaacgaggacctgctgtgcgtggccaatgcaacttaccactgcagaaaggataattgc cccaaccttcccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgt gatgatgacgatgacaatgataagattccagatgacagggacaactgtccattccattac aacccagcccagtacgactatgacagagatgaggtgggagaccgctgtgacaactgcccc tacaaccacaacccagaccaggctgacacagataacaatggggaaggagacgcctgcgca gctgacattgatggggatggtatcctcaatgaacgggacaactgccagtatgtctacaat gtggaccagaaagacactgacatggacggggttggtgatcagtgtgacaactgccccctg gaacacaatccagaccagcttgactctgactcggaccgcattggagacacctgcgacaac aaccaggacattgatgaagacggccaccagaacaacctggacaactgcccctacgtgccc aatgccaaccaggccgaccacgacaaggatggcaaaggcgacgcctgcgaccacgacgac gacaacgatggcattcctgacgaccgggacaactgcaggctggtgcccaatcctgaccag aaggactctgatggtgatggtcgaggtgatgcttgcaaagatgactttgaccaggacaag gtgccagacattgatgacatctgtcctgaaaatgttgatatcagtgagactgatttccgc cgattccagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggtt gtacgccatcagggtaaagaactcgtccagactgtcaactgtgaccccggacttgctgta ggttatgacgaatttaatgctgtggacttcagcggcaccttcttcatcaacaccgagagg gatgacgactatgccggctttgtgtttggctaccagtccagcagccgcttctatgttgtg atgtggaagcaagtcactcaatcctactgggacaccaaccccacgagggctcagggatac tctggactttctgtgaaggttgtgaactccaccacggggcctggagagcacctgcggaat gccctgtggcacacaggaaacacccctggccaggtgcgcacactgtggcatgaccctcgt cacattggctggaaagatttcactgcctacagatggcgtctgagccacaggccaaagaca ggtttcatcagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatc tatgacaaaacctatgctggtggtaggctaggcttgttcgtcttctctcaagaaatggtg ttcttctccgacctgaaatatgaatgcagagattcctaa

DBGET integrated database retrieval system