Oryx dammah (scimitar-horned oryx): 120858643
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Entry
120858643 CDS
T07255
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120858643 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oda03400
]
120858643 (TDG)
Enzymes [BR:
oda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
120858643 (TDG)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120858643 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
120858643
NCBI-ProteinID:
XP_040090767
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
METENAGSYSLQQAQAFYAFPLQQMMTEVPNMAVMNAQEMPTEVPAPAPAQEPTQETPPK
GRKRKPRTTEPKTPVEPQKPAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAEL
LTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLSHMDDH
TLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFS
KEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQL
KGIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYNENPCPGEPCGFS
SNGLAADNGESTFSDIPNGQWMTQSFTDEIPLFSNHCGRQEQERNHL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagagaacgcgggcagctattctcttcagcaagctcaagctttttatgcattt
ccactccaacaaatgatgactgaagttcctaatatggcagttatgaatgcacaagaaatg
ccaaccgaagttccagccccagcacctgctcaggaacccacacaagagactcctccaaaa
ggaaggaaaagaaaacccagaacaacagaaccaaaaacaccagtggagccccaaaaacct
gctgaggccaaaaaatctggcaagtccacaaagtcaaaagaaaagcaagaaaaaattaca
gacacatttaaagtgaaaagaaaagtggaccgtttcaatggtgtttcagaagctgaactt
ctgaccaagactctaccagacattttgaccttcaatctggacattgtcattattggcata
aatccaggactgatggctgcttacaaagggcatcactaccctgggcctggaaaccatttt
tggaagtgcctatttatgtcagggctgagtgaggtccaactgagtcacatggacgatcac
actctaccagggaaatatggtattggatttaccaatatggtggaaaggacaacaccaggc
agcaaggatctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaatta
cagaaatatcagccacgaatagcagtgtttaatggaaaatgtatttacgaaatttttagt
aaagaagtttttggagtaaaggttaagaacttagagtttggacttcaaccccataagatc
ccagatacagaaactctctgctatgtgatgccatcatccagtgcaagatgtgcgcagttt
cctcgcgcccaggacaaagtgcattactacattaagctgaaggacttaagagatcagttg
aaaggcattgaacgaaacacagacgttcaagaagtgcaatatacatttgacctacagctc
gcccaagaggatgcaaagaagatggctgtgaaggaagaaaaatacgacccgggttatgaa
gcagcgtatggcggtgcttacaatgaaaacccctgccctggtgaaccttgtggattctct
tcaaatgggctggctgctgacaatggagaatcaactttcagtgacattccgaatggacag
tggatgacccagtcgtttacagacgagatccctttgtttagtaatcactgtgggaggcaa
gaacaagaaagaaaccacctttaa
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