KEGG   Oryx dammah (scimitar-horned oryx): 120858692
Entry
120858692         CDS       T07255                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda01524  Platinum drug resistance
oda04115  p53 signaling pathway
oda04210  Apoptosis
oda04215  Apoptosis - multiple species
oda05010  Alzheimer disease
oda05012  Parkinson disease
oda05014  Amyotrophic lateral sclerosis
oda05016  Huntington disease
oda05020  Prion disease
oda05022  Pathways of neurodegeneration - multiple diseases
oda05134  Legionellosis
oda05152  Tuberculosis
oda05160  Hepatitis C
oda05161  Hepatitis B
oda05162  Measles
oda05164  Influenza A
oda05168  Herpes simplex virus 1 infection
oda05169  Epstein-Barr virus infection
oda05200  Pathways in cancer
oda05222  Small cell lung cancer
oda05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:oda00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120858692 (APAF1)
   04215 Apoptosis - multiple species
    120858692 (APAF1)
   04115 p53 signaling pathway
    120858692 (APAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    120858692 (APAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    120858692 (APAF1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    120858692 (APAF1)
   05160 Hepatitis C
    120858692 (APAF1)
   05164 Influenza A
    120858692 (APAF1)
   05162 Measles
    120858692 (APAF1)
   05168 Herpes simplex virus 1 infection
    120858692 (APAF1)
   05169 Epstein-Barr virus infection
    120858692 (APAF1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    120858692 (APAF1)
   05152 Tuberculosis
    120858692 (APAF1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    120858692 (APAF1)
   05012 Parkinson disease
    120858692 (APAF1)
   05014 Amyotrophic lateral sclerosis
    120858692 (APAF1)
   05016 Huntington disease
    120858692 (APAF1)
   05020 Prion disease
    120858692 (APAF1)
   05022 Pathways of neurodegeneration - multiple diseases
    120858692 (APAF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    120858692 (APAF1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    120858692 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st NB-ARC WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I APAF-1-like_WHD WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th CARD Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st RMC1_N Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD40_RFWD3 WD40_like Beta-prop_DCAF12 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_WDR11_2nd CARD_2 PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_IFT140_2nd Utp8_b_propeller AAA_16 ATPase_2 AAA_22 NPHP3_N Hira AAA_18 nSTAND1
Other DBs
NCBI-GeneID: 120858692
NCBI-ProteinID: XP_040090859
LinkDB
Position
Unknown
AA seq 1249 aa
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNHSYISFYNALLHEGYKDLAALLHGGIPVVSSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDGSFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSIVQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLTEKNRSQLQDLHKKMVTQFQRHHQLHSLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDGTD
CENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYRQAKLQAKQEVDNGMLYLEWVNK
KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSADDRFIATCSVDKKVKIWNSVTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS
NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS
ITVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKIFLFDIHTSGLLAEIHMGHH
STVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGASFLTS
SDDQTVRLWETKKVCKNSATVLKQEIDVVFQENEVMVLAVDNIRRLQLINGNTGQIDYLT
EAQVSCCCLSPHLQYLAFGTEDGAIQILELLNNRIFQSRNAHKTTVRHIQFTADGKTLIS
SSDDSAVQIWNWQSEDPFFLQAHQETVKDFKLLKNSRLLSWSFDGTVKVWNITTRRIEKD
FVCHQDTVLSCAISSDAAKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVDNT
MLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgcaaaagctcgaaattgtttacttcaacatcgagaagccttggaaagggacatc
aaaacatcctacatcatggatcacatgattagtaatggagttttaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaatgata
cttaaaaaagataatcattcctatatatcattctacaatgctctacttcatgaaggttac
aaagatcttgctgccctgctgcatggtggcattcctgtcgtctcttcttccgatggcaaa
gattcagttagtggaataacttcatatgtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcgattcagcagaagctc
tccaaactgaatggtgaaccgggatgggtcaccatatatggaatggcaggttgtgggaaa
tctgtattagccgcagaagctgttcgagatcattctttcctagaagattgtttcccaggg
ggcgtgcattgggtgtcagttgggaaacaggacaaatctgggcttctgatgaagctacag
aacctttgcgcacgattggatcaggatggaagcttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcaaatt
cttctcacaaccagagataagagtgttacagattcagtaatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtgtctttaattggtgcacttttgcgagactttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgac
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatcgttcagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctctgggacttggaaacggaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtagatttccttactgaaaagaatcgcagccagctccaggatctccacaagaagatg
gtcactcagttccagagacatcaccagttacattctctttcaccagatcaggaggattgc
atgtattggtacaattttctggcctatcacatggccagtgctaatatgcacaaagaactg
tgtgctttaatgttttccctggattggattaaagcaaaaacggaacttgtaggccctgct
catctgattcatgagtttgtggaatacaggcatatattggatgaaaaggatggtacagac
tgtgagaatttccaggagtttttatctttaaatgggcatcttcttggacgacagccattt
cctaatattgtgcagctgggcctctgtgaactggaaacttcagaggtttatcggcaagct
aagctgcaggccaagcaggaggtcgataacgggatgctttacctggagtgggtaaacaaa
aaaaacatgaagaacctctcccgcttggttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaagatggtcaaagaatagcttcttgtggagctgataaaactttacag
gtattcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgctgtgcattctctgcagatgacagatttatagcaacctgctcagtggataaaaaa
gtgaagatttggaattcagtgactggggaactagtgcgtatctatgatgagcactcagag
caagtcaattgctgccatttcaccaacaacagtaatcaccttctcttagccactggttca
aatgactacttccttaaactctgggatctgaatcaagaagaatgtcgaaataccatgttt
ggccatacaaattcagtcagtcactgcagattttcaccagatgatcaggttttggccagt
tgttcagctgatggaacattaaagctttgggatgtgaaatccgcaaatgagaggaaaagc
attactgtgaagcagttcttcctgaattcagaggaacctcaggaggatctggaagtgata
gtgaaatgctgttcgtggtctgctgatggtgctaagataatggtggccgcgaaaaataaa
atctttctttttgacattcacaccagtggcctgttggcagaaatccacatgggccatcat
agcactgtccagtactgtgacttctccccccacaaccatttggcagtggtggctttgtcc
cagtactgtgtggagctgtggagtatggactcaggtttaaaagtagctgattgcagagga
catttaagttgggtccattgtgtgatgttttctcctgatggagcatcatttttgacatct
tctgatgaccagacagtcaggctctgggagacaaagaaagtatgtaagaactctgctaca
gtgttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgatggttcttgcagtt
gacaatataagacgtctgcaactcattaatggaaacacaggtcagattgattacctaact
gaagctcaagtgagttgctgttgtttaagtccacatcttcagtacctggcattcggaact
gaagatggagccattcagattttagaactcctgaacaacagaatcttccaatccaggaat
gcgcacaaaaccactgttcggcacatccagttcacagctgatggaaagactcttatctca
agctctgatgattctgcagttcagatatggaattggcagtcagaggaccctttctttctc
caagcccaccaggaaacagtgaaagactttaaactcttgaaaaattcaagactgctttcc
tggtcatttgatggaacagtaaaggtgtggaatattactaccagaagaatagaaaaagat
tttgtgtgtcaccaggatacagttctttcttgtgctatttcctctgatgctgctaagttt
tcttctacctctgctgacaagactgcaaagatttggagttttgaactcctttctcctctt
catgaattgagaggccacaaaggttgtgtgcgctgctcttccttctctgtggacaatacc
atgttggctactggagacgacaatggagaaatcaggatatggaatgtctcaaatggtgag
cttcttcatttgtgtgctccaatttcagtagaagaaggagctgctactcatggaggctgg
gtgaccgacctttgcttttctccagacaccaaaatgcttgtttctgctggcggatatctc
aagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaaccaat
cttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggt
attttatatattttaaagattttagagtaa

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