Oryx dammah (scimitar-horned oryx): 120863403
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Entry
120863403 CDS
T07255
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda01521
EGFR tyrosine kinase inhibitor resistance
oda04010
MAPK signaling pathway
oda04014
Ras signaling pathway
oda04015
Rap1 signaling pathway
oda04020
Calcium signaling pathway
oda04072
Phospholipase D signaling pathway
oda04151
PI3K-Akt signaling pathway
oda04510
Focal adhesion
oda04540
Gap junction
oda04630
JAK-STAT signaling pathway
oda04810
Regulation of actin cytoskeleton
oda05165
Human papillomavirus infection
oda05200
Pathways in cancer
oda05206
MicroRNAs in cancer
oda05214
Glioma
oda05215
Prostate cancer
oda05218
Melanoma
oda05230
Central carbon metabolism in cancer
oda05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120863403 (PDGFRB)
04014 Ras signaling pathway
120863403 (PDGFRB)
04015 Rap1 signaling pathway
120863403 (PDGFRB)
04630 JAK-STAT signaling pathway
120863403 (PDGFRB)
04020 Calcium signaling pathway
120863403 (PDGFRB)
04072 Phospholipase D signaling pathway
120863403 (PDGFRB)
04151 PI3K-Akt signaling pathway
120863403 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120863403 (PDGFRB)
04540 Gap junction
120863403 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120863403 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120863403 (PDGFRB)
05206 MicroRNAs in cancer
120863403 (PDGFRB)
05230 Central carbon metabolism in cancer
120863403 (PDGFRB)
05231 Choline metabolism in cancer
120863403 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
120863403 (PDGFRB)
05218 Melanoma
120863403 (PDGFRB)
05215 Prostate cancer
120863403 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120863403 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
120863403 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oda01001
]
120863403 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oda04090
]
120863403 (PDGFRB)
Enzymes [BR:
oda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120863403 (PDGFRB)
Protein kinases [BR:
oda01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120863403 (PDGFRB)
CD molecules [BR:
oda04090
]
Proteins
120863403 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
120863403
NCBI-ProteinID:
XP_040095515
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MSQSMSSAQESTWRSKCTAHVDLWLVCAHTCLCVQDTMRLPSTLRAAVLKGQLLLLLLLF
MLGPQASGGLVIIPPGPELVLNLSSTFVLTCSGPAPVVWERMSQKPPQEMTKTQDGTFSS
VLTLVNITGLDTGEYFCGYKGSHGLEASERKRLYIFVPDPSVGFLPVDPEELFIFLTEIT
ETTIPCRVTDPRLVVMLHEKKVDVPLPIAYDPQRGFSGTFEDKTYICKTTIGDREVDSDA
YHVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVNFEWTYPRMESGRLVEPVTD
FLFEMPHIRSILHIPSAELGDSGTYICNVSESVSDHRDEKAINVTVVENGYVRLLGELDP
VQFAELHRSRTLQVVFEAYPPPTVMWFKDNRTLGDSSAGEIVLSTHNVSETRYVSELTLV
RVKVAEAGYYNMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPANGEQTVRCRGRGMPQP
HLTWSTCSDLKRCPRELPPTPLGNSSEEESQLETNVTYWAEEQEFEVVSTLRLRHVDQPL
SVRCTLHNLLGYDVQEVTVVPHSLPFKVVVISAILALVVLTIISLIILIMLWQKKPRYEI
RWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVVEATAHGLSH
SQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYC
RYGDLVDYLHRNKHTFLQRCSDKRRPPSAELYSNALPVGLPLPSHVSLPGESDGGYMDMS
KDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRVTLINESPVLSYTDLV
GFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTF
LPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMA
QPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEFLRSDHPA
ILRSQARLPGFSGLRSPLDTSSVLYTAVQPNEGDNDYIIPLPDPKPEVADEGPLEGSPSL
ASSTLNEVNTSSTISCDSPLEPQEEPEPEPEPQPASHVEPEPKWPPDSSCPGPRAETEDS
FL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtctatgtccagtgctcaggagagtacctggcgcagtaagtgcacagcacac
gttgacttgtggcttgtctgtgcccacacgtgcctgtgtgttcaggataccatgcggctt
ccgagcaccctgcgagctgctgtcctcaaaggccagttgctattgctgctcctgctgttt
atgctgggaccacaggcctccgggggcctggtcatcatacccccagggccagaactcgtc
ctcaacctctccagcacctttgttctgacctgctcgggcccagctccagtggtgtgggaa
cggatgtcccagaaacccccacaggaaatgaccaagacccaggacggcacattctccagc
gtgctgacactggtcaacatcactggactagacacaggagaatacttctgtggctacaaa
ggctcccatgggctggaggccagtgagcgaaaacggctctacatctttgtgccagatcct
tctgtgggcttcctccctgtcgaccctgaggagctattcatctttctcacggaaataact
gagaccacaattccatgccgagtgacggatccgaggctggtggtgatgctgcacgagaag
aaggtggatgtccctctgcccatagcctatgaccctcaacgtggcttctctggtaccttt
gaggacaagacctacatctgcaaaaccaccatcggggacagggaggtggattccgacgcc
taccatgtctacagcctccaggtgtcatccatcaatgtctcagtgaatgcagtgcagact
gtggtccgccaaggggagaatatcaccatcatgtgcattgtgaccgggaatgaggtggtc
aactttgagtggacatacccacgcatggagagtgggcgcctggtggagccagtgactgac
ttcctctttgaaatgccccacatacgttctatcctgcacatccccagtgctgagctggga
gactcagggacctacatctgcaatgtgtcagaaagtgtgagcgaccatcgtgatgaaaag
gctatcaatgtcaccgtggtcgagaacggctatgtgcggctgctgggagagctggaccct
gtacaattcgccgagctccaccgcagccggacactgcaggtggtgtttgaggcctacccg
ccgcccactgtcatgtggttcaaggacaaccgaaccctgggtgactctagcgccggcgag
atcgtgctgtccacgcacaatgtgtctgagactcggtatgtgtcagagctgacactcgtg
cgggtaaaggtggctgaggctggctactacaacatgcgggccttccatgaggatgctgaa
gcccagctctccttccagctgcaggtcaatgtgcctgtccgtgtgctggagctgagcgag
agccaccctgccaatggggagcagacagttcgttgtcgcggccggggcatgccccagcca
cacctcacctggtctacctgcagtgacctcaaaaggtgtccgcgggagctgccgcccacg
ccgctggggaacagttccgaggaggagagccagctagagacgaatgtgacatactgggcg
gaggagcaggagttcgaggtggtgagcacactgcgcctgcgccatgtggatcagccgctg
tccgtgcgctgcacgctgcacaacctgctgggctacgacgtgcaggaggtcaccgtggtg
ccacactccctgcccttcaaggtggtggtgatctcggccatcctggccttggtggtcctc
acaatcatctccctcattatcctcatcatgctctggcagaagaagccacgctatgaaatc
cgatggaaagtgattgaatctgtgagctctgatggccatgagtacatctatgtggaccct
atgcagctgccctacgactccacctgggagctgccacgggaccagcttgtgctcggacgc
accctgggttctggggcctttgggcaggtggtggaggccacagctcacggcctgagccat
tctcaggctaccatgaaagtggccgtgaagatgctgaaatccacagcccgcagcagtgag
aagcaagccctcatgtcggagctgaagatcatgagtcaccttgggccccacctgaacgtg
gtgaacctgctgggggcctgcactaaaggagggcccatctacatcatcaccgagtactgc
cgttatggcgacctggtggactacctgcaccgcaacaagcacaccttcttgcagcgctgc
tcggacaagcgccgcccacccagcgccgagctctacagcaacgccctgcctgttgggctc
cctctgcctagccacgtgtcactgcctggggagagcgatggtggctacatggacatgagc
aaggacgagtcggtggactatgtgcccatgctggacatgaaaggagatgtcaaatacgca
gacatcgagtcctccaactacatggctccttatgataactacgtcccctctgctcctgag
aggacttgccgggtgactttgatcaacgagtccccagtgcttagctacacggatcttgtg
ggcttcagctaccaggtggccaatggcatggagttcctggcctccaagaattgcgtccac
cgagacctggcagccaggaacgtgctcatctgtgagggcaagctggtcaagatctgcgac
tttggcctggctcgtgacatcatgcgggactcaaactacatctccaagggcagcaccttc
ctgcctctgaagtggatggcccctgagagcatcttcaacagcctctacactaccctgagc
gacgtgtggtccttcggcatcctgctctgggagatcttcacgctgggtggcaccccgtac
ccagagctgcccatgaacgagcagttctacaatgccatcaagaggggctaccgcatggcc
cagcctgcccacgcctctgacgagatctacgagatcatgcagaagtgctgggaagagaag
ttcgagatccggccccccttctcccagctggtgctgcttcttgagagactgctgggtgag
ggctacaaaaagaagtaccagcaggtggatgaggagtttctgaggagcgaccacccagcc
atccttcggtcccaagcccgcttgcctggcttcagtggcctccgatctcctctggacacc
agctctgtcctctatactgctgtgcagcccaacgagggggacaatgactacatcatcccc
ctgcctgaccccaaacccgaggttgctgatgagggcccactggagggttcccccagcctt
gccagctccaccctgaatgaagtcaacacctcctctaccatctcctgtgacagccctctg
gaaccccaagaggagccagagccagagccagagccgcagcccgcctcccacgtggagcca
gagcccaagtggccgccggattccagctgccccgggcctcgggccgagacggaggacagc
ttcctgtag
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