KEGG   Ostrea edulis (European flat oyster): 125648500
Entry
125648500         CDS       T09123                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30-like
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125648500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oed03041]
    125648500
Spliceosome [BR:oed03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125648500
 Complex B
    125648500
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    125648500
SSDB
Motif
Pfam: SMN_Tudor TUDOR Tudor_2 DUF2730 DUF4537 KOW6_SPT51-2 DUF4878 Phage_Nu1 MS_channel_3rd
Other DBs
NCBI-GeneID: 125648500
NCBI-ProteinID: XP_048731586
LinkDB
Position
6:72657006..72668990
AA seq 237 aa
MADELQENLATYKLQLQQVEASLTTDPDNEDLKKLKKDLKEVIDLTEELVGNKQLTAIAA
DVGATGSSIGSTEEAVPTEWQVGDSCLAIWSKDGQYYSAKIDEILEDGTCAVNFETYGNT
DVTEVRLLRKVDPAQQKMESEKKPKSKRDLIADQKEYRRKKQQKKAQRLKQMEEEREQEK
NKWLDFNAKTFSKTNKGKVKKSIFATPDAVNGKVGVGTCGQGGRPMTSFQHAEKWKK
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcggacgaacttcaagaaaatctagcgacttataaattgcaattacagcaggtggaa
gcctccttgactacagacccagataatgaagatcttaaaaagctgaagaaggatctcaag
gaggtcattgatctgacagaagaactcgttggaaacaaacaattgacagccatcgcagca
gatgttggcgccacaggtagtagcattggatccacggaggaagctgtaccgacagaatgg
caagtcggagactcttgtctggctatttggtccaaagacgggcagtactacagtgcaaag
attgatgaaatattggaagatggaacatgtgcagtcaattttgagacatatggaaacact
gatgtaacagaggttagattgttacggaaagttgacccagcccaacagaaaatggaatca
gaaaagaaaccaaagtcaaaacgagacttaatagcagaccagaaagaatacagaaggaaa
aagcaacaaaagaaagctcagcgtctgaaacagatggaggaagagagagaacaggaaaag
aacaagtggctggacttcaatgcaaagactttttccaaaacaaataaaggaaaagtgaaa
aagagcatctttgcaactccagatgcagtcaatggcaaagtgggagtaggaacatgtggt
caaggaggcaggccaatgacctcatttcagcatgcagaaaagtggaaaaagtga

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