Ostrea edulis (European flat oyster): 125648915
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Entry
125648915 CDS
T09123
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125648915
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Znf_XAF1_N
TRAF3_RING
zf-TRAF_2
zf-RING_2
Prok-RING_4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125648915
NCBI-ProteinID:
XP_048731915
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All DBs
Position
5:3926178..3945795
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AA seq
560 aa
AA seq
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MLTLQITPPNSLSSQTPAGTPEFVELDPKYVCILCNNVLHDAVQTPCGHRLCQLCADGFL
KDSESKQCPYQEEMCEILRPEQIIRDASARRDIRQLPVYCTNKSRGCQKTVKWKDLEKHI
LECLYEPVLCPYKDSGCQELIPRGSLPEHQQTCVYTPTLCQNCGQTIPKLLITAHEKESC
QKIPVSCEYGCGVEPVPRKEMSQHQESCPKRPQACKYASVGCTFQGVVEDMDEHEKQNTE
GHLQQLTLKLANLDLYSIDIRREKQEMENYRQTTRQQVSEVREEIEEIKRLADDIKSRYR
KRKLDMVELTERIIRVEKIMEECVHPEMYKRTVSDVNILRENIRSLKDRTEQQVAKQEAE
QVAPITQSSSDPHTDTHNQSRQLGLQDARLAELDLRFQILETINYEGVLLWKIMNYRRRK
QEAISGKTLSLYSSPFFTSRYGYKMCARVYLNGDGMGKGTHFSIFFVVMQGEYDALLQWP
FRQKVTFMILDQSGSKRHLSDSFKPDPNSSSFKRPLAEMNIASGCPLFVSHSILESSTNY
IRDDALFVKINVDTNGLVPI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctccagataactcctcccaacagtctgtcgtcccagactcctgctggcacc
ccagaatttgtggagttagatccaaagtatgtgtgtatcctgtgtaacaatgtccttcac
gatgccgtacagactccctgtgggcaccggctgtgtcagctctgtgctgatggcttcctg
aaagactcggagtccaaacagtgcccttaccaggaggaaatgtgcgagatcctcaggcca
gagcagattattcgtgacgccagtgcgcggagggacatccgccagttaccagtttattgt
accaacaaatccaggggctgtcagaaaactgtcaagtggaaagacctagagaagcacata
ctagaatgtttgtatgagcctgttctctgtccgtataaagactcgggctgtcaggaactc
atccctagaggcagtctccctgaacatcagcagacctgtgtttatacccctaccctgtgc
cagaattgtggacaaaccattcccaaattattaataacggcacatgaaaaagaaagctgt
cagaaaatccctgttagctgtgaatatggctgtggtgttgaaccggtccccagaaaggag
atgtcacaacatcaggaaagctgccccaaaagaccccaggcctgtaaatatgcttctgtg
ggctgcacctttcagggtgttgtggaggacatggatgaacatgagaaacagaacacagaa
ggacatttacagcagctcacactgaaactggccaacctagacctgtacagcatagacatc
cgcagggagaagcaggaaatggaaaattacagacaaactactagacagcaagtgagtgaa
gtccgagaagagatcgaggagatcaaaaggctagctgatgacatcaagagccgttatcgg
aaaaggaagcttgatatggtggagttaacggaacggataatccgtgtggagaagattatg
gaggaatgtgttcatcccgagatgtacaagcggacagtcagtgatgtgaacattctgagg
gagaatatccgtagtctgaaggaccgcacggaacagcaggtggcaaagcaagaggcagaa
caggtcgcccccatcactcagtcctcatcagatccacatacagatacacataaccagtcc
cgacaactcggtcttcaggacgccaggctggctgaactggatctacgatttcagatttta
gagaccatcaattatgaaggtgtattattgtggaaaataatgaactaccgacgacggaaa
caggaagctatctcggggaagacactctctctgtacagctcaccgttcttcaccagtcgc
tacggatacaaaatgtgtgcgagagtttatcttaatggcgatggaatgggaaagggaaca
catttttctatatttttcgtggttatgcagggggagtatgatgctctcctgcaatggcca
tttcggcagaaagtgacgttcatgattctggatcagagtggaagcaaacgacatttgtca
gattcattcaaacctgaccccaacagctcgagttttaagagaccgttagcggagatgaac
attgcctcgggttgtccgctgtttgtcagtcactctatattagagtcctctactaattat
atcagggacgatgctttgtttgttaaaattaatgtggacactaatggacttgtacctatt
taa
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