KEGG   Ostrea edulis (European flat oyster): 125649753
Entry
125649753         CDS       T09123                                 
Name
(RefSeq) NHP2-like protein 1 isoform X2
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03008  Ribosome biogenesis in eukaryotes
oed03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125649753
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125649753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oed03041]
    125649753
   03009 Ribosome biogenesis [BR:oed03009]
    125649753
Spliceosome [BR:oed03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    125649753
Ribosome biogenesis [BR:oed03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    125649753
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1
Other DBs
NCBI-GeneID: 125649753
NCBI-ProteinID: XP_048733445
LinkDB
Position
4:complement(17757990..17764958)
AA seq 129 aa
MSQTDEVNPKAYPLADSQLTQEILDLVQQASHYKQLKKGANEATKTLNRGMSEFIVMAAD
AEPLEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRAVISCSVTVNEGSQLRPKIQTI
QQNIEKLLI
NT seq 390 nt   +upstreamnt  +downstreamnt
atgagtcagactgatgaagtcaaccctaaagcatatcctttggctgattcgcagctcaca
caggagattctggatctggtacaacaagcctcacactacaagcagctcaagaaaggtgcc
aatgaagcaacaaagactctgaacagagggatgtcggagttcattgttatggcagccgat
gctgagcctttggagatattgttacatctgccattgctgtgtgaggacaagaatgttcct
tacgtatttgtgagatcaaaacaagcactaggaagagcctgtggagtatccagggctgtc
atttcctgctctgtcacagtcaatgaggggtctcaactgaggccaaagattcagaccatt
cagcagaacattgagaagctcctcatataa

DBGET integrated database retrieval system