Ostrea edulis (European flat oyster): 125650668
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Entry
125650668 CDS
T09123
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125650668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125650668
04121 Ubiquitin system [BR:
oed04121
]
125650668
Membrane trafficking [BR:
oed04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
125650668
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125650668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
TRM82_WD
F-box-like
F-box
Beta-prop_SPT8
CFAP251_N
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
PAC11
WD40_like
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_HPS5
Mcl1_mid
PQQ_2
Beta-prop_Aladin
Beta-prop_RIG_2nd
F-box_4
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
125650668
NCBI-ProteinID:
XP_048735090
LinkDB
All DBs
Position
5:85713705..85745172
Genome browser
AA seq
445 aa
AA seq
DB search
MSAKGDKETKCSLSLLPPELVEKIFLYLNVRDIARLSCVCVSWREIANVDHIWLHHCMKK
KWMRFGVHDNILQESPMCKPHSNVSKTSPYFQLYIPKETRLSPICQWKNVFIRVVHLFHN
WDKGRYTQPVTLKGHRDQVKAIDCNRTCIVSGSEDHTLIVWSLQNCTKLYEIKAHSDAVT
AVILKDNMLVTGCADSSVRVFDSTTGQVVFSLQGHQGSVDHLAIIEDYIVSAGTDRTVMV
WSISQRKHVHTLRGHVDEIECLAHCGYTVVTGSWDKAVMVWDVRKEDAVQMLHGHREVVT
CCYCTEDTVVSGSGDSDVRIWRIPSGECLHVLSAHKEEVYCLACTSEVIASGSSDSTIII
WNFSGNLLHTLTGHLGVVRCLHINEFRLVSGGDQKKINVWDYRTGELLNTVHRNPTRLHK
MLVSDTKLITASPETPGTITVISYW
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaaggagacaaagaaaccaaatgcagcctgtccttgctccctccagagtta
gtggagaagatttttctataccttaatgtgagagacattgctcgactttcctgtgtctgt
gtttcatggagggaaatagccaatgttgatcatatatggctgcaccattgtatgaagaag
aagtggatgagatttggtgtgcatgacaacatcctccaggaatctccaatgtgtaaacct
cattccaatgtctccaaaacctcaccttacttccagctatacattcccaaggaaaccagg
ctttccccaatatgtcaatggaagaatgtgttcattagagtagttcacctgtttcataat
tgggataaaggaaggtacacacagccggtgacactcaaaggacatagagaccaggtcaag
gccattgactgtaataggacgtgtattgtcagtggatcggaggaccatactctaattgtt
tggagtttacagaactgcacaaagttatacgaaatcaaagctcattctgatgctgttaca
gctgtcattttaaaggacaacatgctggtgactggatgtgctgacagttcggtccgagtt
tttgactccactacgggacaggtggtcttctctctacaaggacaccaaggatcggtggac
cacctggctatcatagaggactacattgtcagtgctggtactgataggacggtgatggtc
tggtctatttcacaaagaaaacatgtacataccctacgaggacatgtcgatgaaattgag
tgtttggcccactgtgggtacaccgttgtgacgggatcgtgggacaaggccgtgatggtg
tgggacgtgagaaaggaggatgctgtacaaatgcttcatggccacagagaagttgtgacg
tgttgttactgcactgaggatacagtagtgagtggaagtggagactcagatgtacggatc
tggcggattccgtcaggagagtgcctccatgttctgtctgcccacaaagaggaagtgtat
tgcctggcttgtacatcagaggtcatagcctcaggctcatcagacagtactatcatcatt
tggaattttagtgggaacctcttgcatacgctgactggtcatctcggtgttgtcagatgc
ctacacatcaacgagtttcgcttagtgagcgggggcgaccagaaaaaaattaacgtctgg
gattacagaactggagaattactaaataccgtccatcgtaatccaaccaggctacataag
atgttagttagcgacacaaaacttatcacagcctcccccgaaactccagggaccatcact
gtgatcagctactggtaa
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