Ostrea edulis (European flat oyster): 125652594
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Entry
125652594 CDS
T09123
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125652594
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-TRAF_2
TRAF3_RING
RING_XB3-XBAT31
zf-RING_5
Serine_rich
zf-C3HC4_4
DUF2730
Motif
Other DBs
NCBI-GeneID:
125652594
NCBI-ProteinID:
XP_056021758
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Position
5:31696449..31737991
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AA seq
550 aa
AA seq
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MAEATFSSLSSSSLKSSLQQTPPGNPVFVAFDDKYRCVVCNGIVREAVQTPCGHRACEQC
IFQLLHGNPKKVKCPAGEETCSFLVLSEIHRDSGARREVRLLLVFCTFKTEGCEKILPWK
DLQDHEIMCTYRLVECRFSSEGCKVVVIKRDVEIHQKQCPFRLESCKFCQQEIQNQLVQE
HLEKTCPQYVIQCTYNCGTNPAPRVQMEQHSKECPRRPLKCKYHSIGCEFTGSEEEMEMH
TRSETDSHIQLSVVRNTENALEVLHSREVTQTMDVKITELEHLLTKNLQVIEDLKGGVDT
MKKAMKDIKLKVVAQTERLITVERKVENLADNEAHNKLSRDMMMIKETQNTLEGRINQLE
RAGPMGGSNGINGTLPAQIQQHERQLGIMDLRMAELDLRFQVMETASYNGVLMWKIRDYL
RRKEDARTGKTISLYSQPFYTGRFGYKMCARVYLNGDGVGKGTHLSLFFVVQRGEYDALL
PWPFKQKVTLMLLDQENGTRNLVDSFRPDITSSSFKRPTSEMNVASGCPLFHFQTLPVYK
DRQNLSDIAW
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctactttcagttctctttcatcatcgagtcttaaatcatctcttcaacaa
acccctcctggcaacccagtctttgttgcgttcgatgacaagtacaggtgtgtcgtatgt
aatgggatagttagagaggctgtccagacgccatgtggacaccgggcgtgcgagcaatgc
atcttccaattactacacgggaatcccaagaaggtgaaatgtccggccggggaggagacg
tgcagttttctggtattaagcgagattcacagggattctggggcgcggagagaggtccgc
cttttgcttgtcttttgtacctttaaaacagaaggttgtgagaaaattttgccatggaaa
gatttgcaggatcatgaaataatgtgtacctaccgactcgtggagtgcagattttcctcc
gaaggatgtaaggtcgttgtgatcaagagagacgtagagattcaccagaaacaatgtcct
ttccggttggagtcctgcaagttttgtcaacaggagatccagaatcaactcgtgcaggaa
cacttggaaaagacctgcccccagtacgtgattcaatgtacatacaactgtggaacgaac
ccggctccaagagttcagatggagcaacatagtaaagaatgcccccgacgaccgctaaag
tgtaaataccacagcattggatgtgaatttacagggtcggaggaggaaatggaaatgcac
acgcggtcagagacagattctcatatccaactttctgtggtacgaaacacagagaatgca
ctggaggtactccattcccgagaagttacccagacaatggatgtaaaaataaccgaactt
gaacatctgttgacgaagaatttacaagtcattgaagatctgaaaggaggagttgacaca
atgaaaaaagcaatgaaagacattaagctgaaagttgtcgcacaaacggagaggctcatc
actgtcgaaaggaaagtggaaaatctcgctgacaatgaagcacataataaactgtcacgt
gacatgatgatgataaaggagacacagaacacactggaaggaagaattaaccaattagaa
agagcaggacctatgggaggatcaaatgggatcaatggaacattaccagcacaaatccaa
cagcatgaacgtcaactcggcatcatggacctcagaatggcagagctggatttacgtttc
caggtgatggagacggcaagttacaacggagttctgatgtggaaaatccgagactacctg
cgtcgtaaggaagatgcaagaacaggaaagactatttctctttacagccaacctttttac
accggtagatttggatacaaaatgtgtgcaagggtctatctgaatggagacggtgtagga
aagggtactcacctttctcttttctttgttgttcaaagaggagaatacgacgcgttgttg
ccttggccattcaagcagaaagtcacgttgatgttgttggaccaagaaaacggcacccga
aatttggtggattcttttagaccggatataaccagctccagtttcaagcgccccacgtct
gagatgaatgtggcctctggctgtccgttatttcattttcagactctccctgtgtataag
gataggcaaaatttgagtgacattgcctggtga
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integrated database retrieval system
