Ostrea edulis (European flat oyster): 125660039
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Entry
125660039 CDS
T09123
Name
(RefSeq) dedicator of cytokinesis protein 1-like isoform X1
KO
K13708
dedicator of cytokinesis protein 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04148
Efferocytosis
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125660039
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125660039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125660039
Membrane trafficking [BR:
oed04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125660039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOCK
DOCK_N
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
125660039
NCBI-ProteinID:
XP_056005671
LinkDB
All DBs
Position
9:complement(58647166..58785851)
Genome browser
AA seq
1866 aa
AA seq
DB search
MWQKTDKSKKYGVVLYNYSSRLPHRLTLNIGDTVHIGEELDDWFFGYKIKNKNESGIFPK
SYVYVREAVVAKFGSLERVMSTESPIAQEINTVLREWYNIWKQFYLERNEELEKIEGMML
ELMDWRKKIMSRKLTNEEVKDLQQKVSSRIDSGNAMLGLDLVVRDEQGNILNPDDTSVIE
LYKQHETASDRIRMEQNTVSKDRDSSITGPQTFNLFVQLRNFVCRIGEDADILMSLYDAK
FSKFISENYIVHWSKDGVPKDIEMLNNFRVVFTDLGSRDRNREKVFLVFQIIRIGVMDSK
DLEDKKQTRGLRRPFGVAAIDITEYMNGSKTDAEEDKQIFIPFQPCGEKEFMDSLIKKVV
VAKEINHKGQGLWVSLKVLQGDVKQVKEDYPHLVGPNTCVSRKLGFPDVIMPGDVRNDIY
VTIKGGEFTRGPAKTADKNVEVTMVVCNNKGEILQNVISHGCGGEMMSHYKSLIYYHEDK
PKWQETVKVAISTEEEFKGLHLKFTFKHRSTSDAKDRSERPFAMSFIKLMNKNSTTLSDT
DHNLLVYKEYNSADLKSSKKMKISEKKEDRDKFSPYLDLPSTREKFNEEQSMQPNSKVTL
FSGPFTLSSKDSFMIGSFVCSTKLTHNVVLLGLLQWQDIMSDTAKLRDHLEKLMMVDGEE
IVKFLQDLLDSLFSILMQNTISDVYDNLVFDALVHIISLISDRKYHQFRPVLDAYVESSF
SFAMAYQKLMIILRDYVDKAMETNQKILKSAMKSLEYLLKFIVQSRNHFARLNDGRGKQS
FELQLKQLIKSISNMMLYTSDNTLVAQGSALKYICATIPDILKVFDAVELSHLMVEFINN
VPKERLTKQKLKCIDDLVHSKLFRPPGCRLILLPMMLQHTRTLMEQSEEVEDCIDVLSHI
LDLAFPRDTSCQTSNDEDISLIAGMSLRTVIQACIKLDKSSKEAIKCVCVLLSMLRQMKE
NHFSQYMETEEFAFLIDLRDFLMEILMLFLDLVSNSVFPDDWMEMIMLGNSIILRALQIF
ARVIHERFTQEFEQELWGFFFKCSISFLTQKSLQLEHFSSSKRTKIVCRYRDMRREAGFE
IRQMWFHLGPQKIHFIPDLVGDILEMTLIPETELRKATMPIFFDMMVCEYMQIEPATRKI
KGNFNQVEHELIMCLDALVEGGQGDEEYKDLFCETLYKLCSNHSTLKDQGLRFVNTVKEL
LQHLLEYRKIIQSEVKELRMSCIVNLLNFYHDIERQEMYIRYLYKLCDLHMKCDNYTEAA
NTLKLHVDLLKWTDDGLEPMLHSTWYPNARTHRELKENLYYDIISFFDKGKMWEKGIELT
KELVHLYEEELFDYERLSVILKRQAELFACIIRELRPDPEYFRVGYYGLGFPSFLQNKVY
IYRGKEYERLTDFNLRMQTLFPNAELLKSLSPPSNDVKASDKQYLQINAVTPVLQLHERF
RNKCVDEKILKYFSVNEVQKFTFSRRMEESGGDISQMWLERTFLTTLYSFPGILCWFPVN
NTDTKSVSPLENAIETLESTNKRINSLIEQHIADVNLSTNNLGMLLNGVVDASVNGGISN
YKVFYSEGYGETEIQLHLVPKLKEVTRKQVVLLREALNIHSRKVSEELKPFHEHMEHRFK
EMVKLIHKEYNLNLPEANTATLKRYKSMSAVSLSRVSEAFNNQLLMTEAAFPVTNSKISP
SGRSPSVFIKPDKSASVTPMRTGGIGRMNLFKRTSVASTANLSDHSSSEGGGSNRNSLEA
PIELSEQITPRRPLRTDDQRRLSRPNSSQLMPPIMNSASNLSLVSNTSSTNENSDAEPVE
ELPTPPLPEKTAYSDYSNIEISPAPSHHRSNSGNRKSKPVPPLPTGTNGTPPPVPKKYTS
KQASMT
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaaagacagacaaaagtaaaaaatatggagttgttctgtataactacagctcc
cggctgccacacagactgaccttgaatatcggggacacagttcacatcggggaggagtta
gatgattggttttttggatacaaaatcaagaacaagaatgaaagtggaatcttcccgaag
tcctacgtttatgtgcgggaggcggtggtggccaaatttggttccttggaacgtgtgatg
tccacagaatcccctatagctcaggaaattaacacagtcctccgagaatggtacaacata
tggaaacagttttacctggagcggaacgaggagctggagaagatcgaggggatgatgctg
gagttgatggactggagaaagaagatcatgtccaggaaactcaccaatgaagaagtcaaa
gatcttcaacaaaaagtatcgtctaggatagactctgggaatgcgatgttgggtctagac
ttagtagttagagacgaacaaggaaacatcctcaatcctgatgacaccagcgttatcgag
ctttataaacagcatgaaacagcatcagacagaataagaatggaacaaaatacagtgtct
aaggatagagatagctcaatcacggggccccagacattcaacctttttgttcagcttcgg
aatttcgtatgccgcattggggaagatgctgatatactcatgagcttatacgatgccaag
tttagcaagtttatcagtgagaactatattgttcattggagtaaagatggtgttccgaag
gatatagaaatgctcaataacttcagggttgtgttcacagatcttggttcgagagatcgc
aacagagagaaagtctttctagtcttccagatcattagaataggtgtgatggattccaaa
gacttggaagataaaaaacaaacccggggacttcgccgtccattcggagtggcagctatt
gatattacagagtacatgaatgggtcaaaaaccgatgctgaggaagacaagcaaatcttc
atccctttccagccttgtggagaaaaagagttcatggatagtctgatcaaaaaggttgta
gttgccaaggaaattaaccataaagggcagggtctctgggtgtctctgaaagtgctacag
ggagacgtcaagcaggtaaaagaggattacccacacttagtgggtccaaatacttgtgtc
tctagaaaactaggctttccagacgtcatcatgccaggggatgtgcgtaatgatatttat
gtcacaatcaaaggcggagaatttactcgtggaccagctaaaacagccgacaaaaatgta
gaggtgacgatggtggtatgcaacaacaaaggagaaattcttcagaatgtgataagccac
ggctgtggaggggagatgatgtcacattacaaatctctgatctactaccatgaggacaag
ccaaaatggcaggaaactgtcaaggttgccatatctaccgaggaagaatttaaagggctg
catcttaagttcactttcaaacacagatcaacaagtgatgccaaagacagatcagagaga
ccattcgcaatgtcattcatcaagttgatgaacaaaaactcgacgacactatcggacacc
gatcacaatcttctagtctacaaggagtacaatagtgccgacttgaaaagttctaaaaaa
atgaagatttcagagaagaaggaagatcgggacaaattttctccatacctggatttgcca
tcaacaagagaaaaatttaatgaggagcagagtatgcagccgaacagcaaagtgacgctt
ttctcaggaccatttactctcagttcaaaagacagctttatgattggttcatttgtgtgt
tcaacaaaactcactcacaatgttgttttgctcgggctcctccaatggcaggacattatg
tccgacactgcaaagcttcgagaccatcttgaaaaactcatgatggtggatggagaggaa
attgtgaagttcttacaagatttgctggactctttattcagcattctgatgcagaatacc
atttcggacgtttatgacaatttggtgtttgatgccctggtccatataattagtttgatc
tcggacagaaaataccaccaattccgaccagtccttgatgcttatgttgaaagttctttc
agttttgctatggcttatcagaagttgatgattattttacgagactatgttgacaaagcc
atggaaaccaatcagaaaatattgaagagtgccatgaagtccctagagtacctgctcaag
tttattgttcagtcacggaatcactttgcaagattaaatgatggcagaggaaagcagtca
tttgagttacagctcaaacagcttatcaagtccattagcaacatgatgttgtacaccagt
gacaacacgctggtagctcagggatcagctttgaaatatatatgtgccacaataccagac
atcttgaaggtgtttgatgctgttgaactaagtcatttaatggtggagtttattaacaat
gtgccaaaagagagactgaccaaacagaagctgaaatgtattgatgaccttgtacatagc
aaattattcagacctccagggtgccgactgattctacttcccatgatgctgcagcacaca
cggacgttgatggagcagagtgaagaagtggaggactgcattgatgttttatctcatatt
ttagatctggcattccctagagatacaagttgtcagacttccaatgatgaggatatttca
ttgattgctgggatgagcttaagaactgtcatacaggcctgcatcaaactggataaaagc
tccaaagaagctattaagtgtgtgtgtgttctgctgagcatgctgcgccagatgaaggag
aatcacttctcacagtacatggagacggaagagtttgccttcctgatagatctgagggat
tttcttatggaaattctcatgcttttcttggacctggtgtccaacagtgtcttcccagat
gactggatggaaatgattatgttaggaaacagcattatactgcgtgccttgcaaatattt
gccagagtaatacatgaaagatttacacaggagtttgaacaagagctctggggatttttc
ttcaagtgctccatatcattcctcactcagaaatctctgcaattagaacacttcagcagc
tccaaaaggaccaaaatagtgtgcaggtatcgagatatgaggagggaagctggttttgag
ataagacaaatgtggttccacttagggccgcagaagatccacttcattccggatttggtt
ggtgatattttggaaatgacattaataccagaaactgaactgaggaaagcaacgatgccc
attttttttgacatgatggtgtgtgagtacatgcagattgagcctgccactaggaagata
aagggcaactttaaccaggtagaacatgagctgatcatgtgcctggacgctttagtggag
ggaggtcaaggcgatgaggagtacaaggatctcttctgtgaaacactttacaaactgtgt
agtaatcacagtactctgaaggaccagggccttcggttcgtgaacactgtgaaggagtta
ctgcagcatttactggagtacaggaagatcatccagagtgaagtcaaagagcttagaatg
agctgtattgtcaaccttctgaatttttaccatgacatcgagagacaggagatgtatatt
cgatacctgtacaaactttgtgaccttcacatgaaatgtgataactatactgaggcagca
aacactctcaaactccacgtggatcttctcaagtggacagatgatggacttgagcccatg
ctgcacagcacgtggtatccgaatgcacgcacacacagagaactcaaagaaaatctctat
tatgacatcatctctttctttgacaagggaaagatgtgggaaaaaggtatagagctaacc
aaagaactagtgcacctgtacgaggaggaactgtttgactatgaaaggcttagtgttatc
ctgaaaaggcaggccgagctgtttgcctgtatcataagagaactgcgtcctgacccggag
tacttcagggtgggctattatggccttggatttccttccttcttgcagaataaggtgtac
atctacagaggcaaggaatatgagaggcttacagatttcaacctgcgaatgcaaaccttg
tttccaaatgcagagctgctgaagtccttgtctcctcctagcaacgatgtaaaggcctct
gacaagcaatatttacaaataaatgccgttactccagtgttgcagttacatgaaagattt
cgtaataaatgtgtcgatgagaagatcctgaagtatttctctgtgaatgaagtgcagaag
tttacattttctaggagaatggaggagagcggaggggatatttctcaaatgtggttagaa
aggacctttctaacgaccctgtattctttccctggtatcctttgctggttccctgtcaac
aacacagacacgaaaagtgttagtcctttggagaatgccattgaaaccctggaatcaacg
aacaagaggatcaactcactgatcgagcagcatatagcagatgtcaacctcagcaccaac
aacctagggatgttgttgaatggtgttgttgatgcttccgtcaatggaggaatatccaac
tacaaggtattttattctgagggctatggagaaacagaaatacagttgcatttagtccct
aaactaaaggaagtcaccagaaagcaggtggtgcttttacgagaggcattaaatatacac
agtcgcaaagtttctgaagaactgaagcctttccatgaacacatggaacatagattcaag
gaaatggtgaagctgattcataaggagtacaatctgaatcttccagaagcaaacacagcc
accctgaagcggtataaatctatgtcagctgtaagcttgagtcgtgtcagtgaagcattt
aataaccagttactgatgactgaagccgcgtttcctgttaccaactccaagatttctcca
agtggccggtctccatctgtgttcatcaaaccggataaatctgcctccgtcacccctatg
agaacgggggggataggcaggatgaatctcttcaaacgtacatcagtggcctccacagcg
aatttgtcagaccactctagcagtgagggagggggaagcaataggaattcgctggaagca
cctattgagctatctgagcagattacaccaagaagacccttgcgaacagatgaccagcgc
cgactaagtcgtccaaacagcagccagttaatgccccctatcatgaacagcgcaagcaac
ttaagtctagtctccaacacatcatccaccaatgagaacagtgatgcagagccagtggag
gaactgcccacaccgccccttcccgagaaaacagcatattcagactacagcaatatagaa
atctcacctgccccatcacatcaccgctccaatagcggtaatcgtaaatccaagcctgtt
cctcctctgcctacagggacgaatggaactccaccgcctgtgccaaaaaaatacacttct
aaacaagcatctatgacatga
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