Ostrea edulis (European flat oyster): 125663589
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Entry
125663589 CDS
T09123
Name
(RefSeq) actin-1-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125663589
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125663589
09142 Cell motility
04814 Motor proteins
125663589
04820 Cytoskeleton in muscle cells
125663589
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125663589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125663589
03019 Messenger RNA biogenesis [BR:
oed03019
]
125663589
03036 Chromosome and associated proteins [BR:
oed03036
]
125663589
03029 Mitochondrial biogenesis [BR:
oed03029
]
125663589
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125663589
04147 Exosome [BR:
oed04147
]
125663589
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125663589
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125663589
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125663589
NuA4 complex
125663589
Chromatin remodeling factors
BAF complex
125663589
PBAF complex
125663589
GBAF(ncBAF) complex
125663589
SWR1 complex
125663589
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125663589
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125663589
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125663589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125663589
NCBI-ProteinID:
XP_048751817
LinkDB
All DBs
Position
1:19515667..19533460
Genome browser
AA seq
379 aa
AA seq
DB search
MSDDNDWLEAVVIDNGSGSCQAGFAGEDAPQSVFPSVVGRPRYQTRLHSTAWSDSYVGDK
ALSIGGAVALRYPIERGIITDWHDMELLWQHVFESELRTKSEEKKVLMTDAVHTPVGNRE
KMTQVMMEKFNVAAFYVINQAILSLYASGRGCGTIVNMGDGVTHVYPIYEGFTVLSASRR
LELAGRDLTFYLQKLLYEKGYSFTTSVEMEIVKDMKEQLCFVSQDYQKDLHTASSSSDLE
KSYKLPDGNEIKLRSERFQCPEAMFQPSMLGMNSGGVHEVLNNSIMACDIDLRGLLYNNV
IVSGGTTMCSGIVDRLQSEARALTPDHLRVHVVAPPERKYLSWIGGSIIASLSTFQQMWI
TQEEYNEFGPNIVHRRCKY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgataatgattggttggaagcagtagtcattgacaatggatccggatcctgt
caagcggggtttgcaggagaggatgcccctcagtctgtttttccgtcggtagtgggaaga
cccagatatcagacaagattacacagtaccgcatggtcagacagctatgtgggagataaa
gccttgtccattggtggagctgtggcactccgttaccctattgagaggggtataataact
gactggcatgatatggaattattatggcagcacgtttttgagagtgaattaagaacaaag
tctgaagaaaaaaaggttctcatgacagatgcagttcacactccagtgggaaaccgtgaa
aaaatgacacaggtaatgatggaaaaattcaatgttgctgctttttatgtgataaaccaa
gccattctttcactgtatgcatcaggaaggggatgtggaacaatagtgaatatgggagat
ggagtcactcatgtctatccaatttatgaagggtttactgtcttatcagcaagtaggcga
ctggaattagcaggaagagatctaacattctatttacagaaacttttatatgagaaaggc
tattcattcaccacttcggtggagatggagattgtgaaggatatgaaggaacagctatgt
tttgtcagccaggattatcagaaagaccttcacacagcatcctcctcctcagatttggag
aaatcttacaaattgccggatggcaatgaaattaaattaagaagtgaacggtttcaatgt
cccgaagccatgtttcagccatcaatgctcgggatgaactctggtggagtccatgaggtt
ctcaacaacagtatcatggcttgtgatatagatctgagaggcttattatacaacaatgtc
attgtttctggaggaactacgatgtgctcaggtattgtcgacagactgcaatctgaagcg
cgagcactcacaccagaccacttacgggtgcatgtagtggcacccccggagagaaagtat
ttatcttggattggaggatccattattgcatccttatcaacgttccaacaaatgtggatt
acccaggaggagtataatgaatttggacccaacatagttcatcggcggtgcaagtactaa
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integrated database retrieval system