KEGG   Ostrea edulis (European flat oyster): 125663589
Entry
125663589         CDS       T09123                                 
Name
(RefSeq) actin-1-like isoform X1
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125663589
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125663589
  09142 Cell motility
   04814 Motor proteins
    125663589
   04820 Cytoskeleton in muscle cells
    125663589
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125663589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125663589
   03019 Messenger RNA biogenesis [BR:oed03019]
    125663589
   03036 Chromosome and associated proteins [BR:oed03036]
    125663589
   03029 Mitochondrial biogenesis [BR:oed03029]
    125663589
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125663589
   04147 Exosome [BR:oed04147]
    125663589
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125663589
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125663589
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125663589
    NuA4 complex
     125663589
  Chromatin remodeling factors
   BAF complex
    125663589
   PBAF complex
    125663589
   GBAF(ncBAF) complex
    125663589
   SWR1 complex
    125663589
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125663589
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125663589
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125663589
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125663589
NCBI-ProteinID: XP_048751817
LinkDB
Position
1:19515667..19533460
AA seq 379 aa
MSDDNDWLEAVVIDNGSGSCQAGFAGEDAPQSVFPSVVGRPRYQTRLHSTAWSDSYVGDK
ALSIGGAVALRYPIERGIITDWHDMELLWQHVFESELRTKSEEKKVLMTDAVHTPVGNRE
KMTQVMMEKFNVAAFYVINQAILSLYASGRGCGTIVNMGDGVTHVYPIYEGFTVLSASRR
LELAGRDLTFYLQKLLYEKGYSFTTSVEMEIVKDMKEQLCFVSQDYQKDLHTASSSSDLE
KSYKLPDGNEIKLRSERFQCPEAMFQPSMLGMNSGGVHEVLNNSIMACDIDLRGLLYNNV
IVSGGTTMCSGIVDRLQSEARALTPDHLRVHVVAPPERKYLSWIGGSIIASLSTFQQMWI
TQEEYNEFGPNIVHRRCKY
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgagtgatgataatgattggttggaagcagtagtcattgacaatggatccggatcctgt
caagcggggtttgcaggagaggatgcccctcagtctgtttttccgtcggtagtgggaaga
cccagatatcagacaagattacacagtaccgcatggtcagacagctatgtgggagataaa
gccttgtccattggtggagctgtggcactccgttaccctattgagaggggtataataact
gactggcatgatatggaattattatggcagcacgtttttgagagtgaattaagaacaaag
tctgaagaaaaaaaggttctcatgacagatgcagttcacactccagtgggaaaccgtgaa
aaaatgacacaggtaatgatggaaaaattcaatgttgctgctttttatgtgataaaccaa
gccattctttcactgtatgcatcaggaaggggatgtggaacaatagtgaatatgggagat
ggagtcactcatgtctatccaatttatgaagggtttactgtcttatcagcaagtaggcga
ctggaattagcaggaagagatctaacattctatttacagaaacttttatatgagaaaggc
tattcattcaccacttcggtggagatggagattgtgaaggatatgaaggaacagctatgt
tttgtcagccaggattatcagaaagaccttcacacagcatcctcctcctcagatttggag
aaatcttacaaattgccggatggcaatgaaattaaattaagaagtgaacggtttcaatgt
cccgaagccatgtttcagccatcaatgctcgggatgaactctggtggagtccatgaggtt
ctcaacaacagtatcatggcttgtgatatagatctgagaggcttattatacaacaatgtc
attgtttctggaggaactacgatgtgctcaggtattgtcgacagactgcaatctgaagcg
cgagcactcacaccagaccacttacgggtgcatgtagtggcacccccggagagaaagtat
ttatcttggattggaggatccattattgcatccttatcaacgttccaacaaatgtggatt
acccaggaggagtataatgaatttggacccaacatagttcatcggcggtgcaagtactaa

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