Ostrea edulis (European flat oyster): 125666730
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Entry
125666730 CDS
T09123
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125666730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125666730
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oed03310
]
125666730
Transcription factors [BR:
oed03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125666730
Nuclear receptors [BR:
oed03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125666730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ATP-synt_F6
Motif
Other DBs
NCBI-GeneID:
125666730
NCBI-ProteinID:
XP_048755932
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Position
10:9091571..9193417
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AA seq
485 aa
AA seq
DB search
MSAIVAYQHPVHPYNMHGQYPDLFIDPARYSPIMGKILHDDPHPDTQTSLENMVLSPSGP
YIPGEGDYQYGHSDRMVSSTINDKKKKGVGVPGKSIEEELCRICGDRASGYHYNALSCEG
CKGFFRRSITRGATYNCKYGGNCEMDMWMRRKCQSCRLKRCREVGMKEECLLSEEQCKAR
DARRKAKQRYSQSVQECSSEKKPALNSECNSNSGEGIESKAQSPPEVKFSSTLSPYAIID
SRPIHSVSEDTRKLVEKLVKLQDKFEFPEESQVDEAIDIDLSREESGEHVLMSLSKMTVL
ITHLIVEFAKSLPGFSKLNKEDQIVLLKAASSEVMALRASRMYDPASRSIVLANGIPLTI
ANMEATGQPKEYTELVFKLCHDMAELSSDNAEYALFMAISIFSADRAGLTNRDLVEQIQK
VYVDALDEYENKKRVKGGCALAKYLLRLIDLRNISSEHSKMLNILPIDESAMPSVVKDIY
MQSDK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatcgtggcgtaccaacatcctgttcacccctataacatgcatgggcagtat
cctgatctatttatagatccggcccgatactcgcccatcatggggaagatactccatgac
gatcctcatccggacactcaaacctccctagagaacatggtcctcagcccctccggacca
tatatccctggggagggggactatcagtatggacactcggaccgcatggtcagcagtacc
atcaacgacaaaaagaagaagggggtcggagttcccgggaagagcatcgaggaggaattg
tgtcgaatttgtggagaccgggcctcaggctatcattataatgcactcagttgtgagggg
tgtaaaggtttcttccgtcgcagtattactcgaggtgctacatacaactgtaaatatggt
ggaaactgtgaaatggacatgtggatgcgacggaaatgtcagtcgtgtcgccttaaacga
tgtcgagaagttggaatgaaggaggagtgtctgctgtctgaggaacagtgtaaagcgagg
gacgcacgacggaaagctaaacaacgatattctcagagtgttcaggagtgcagctcagaa
aaaaagccggccttaaactcagagtgtaattccaactcgggggaggggattgagagcaag
gctcagtctccgcctgaggtcaagttctcttccactctatctccttatgccattatagac
tcgagacccatccactcggtgtcagaggacacacggaaactggtggagaaactggtgaaa
ctgcaggataaatttgagtttcctgaggagtctcaagtggatgaggctatagatatagac
cttagccgtgaggagtcgggagagcatgttctgatgagcctctcgaaaatgacggtcctg
atcactcacctcatagtggagtttgccaagagcttgccaggcttctccaaactcaacaaa
gaggaccaaatcgttttgctcaaggcagcctccagtgaagtgatggcgttgagagccagt
cgaatgtatgaccctgcctctagatctattgttctggccaatggcattccactgaccatt
gccaatatggaagctactggtcagccaaaagaatacacagagcttgtcttcaaactgtgt
catgacatggcagaactcagctccgataatgcagagtatgcccttttcatggccatcagt
atattctcagctgaccgggctggattaacgaatcgtgacctggtggaacagatccaaaag
gtttatgtggatgctctggacgaatatgaaaacaaaaaacgggtcaaaggagggtgtgct
ctcgccaaatacctgttacgcctcattgaccttcggaacatcagttccgagcactcgaaa
atgctgaacatcctgccaatcgacgagtcagccatgccttctgttgtcaaggacatatac
atgcagtctgataaatga
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