KEGG   Ostrea edulis (European flat oyster): 125669554
Entry
125669554         CDS       T09123                                 
Name
(RefSeq) actin-like isoform X1
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04517  IgSF CAM signaling
oed04518  Integrin signaling
oed04519  Cadherin signaling
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125669554
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125669554
   04518 Integrin signaling
    125669554
   04519 Cadherin signaling
    125669554
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125669554
  09142 Cell motility
   04814 Motor proteins
    125669554
   04820 Cytoskeleton in muscle cells
    125669554
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125669554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125669554
   03019 Messenger RNA biogenesis [BR:oed03019]
    125669554
   03036 Chromosome and associated proteins [BR:oed03036]
    125669554
   03029 Mitochondrial biogenesis [BR:oed03029]
    125669554
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125669554
   04147 Exosome [BR:oed04147]
    125669554
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125669554
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125669554
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125669554
    NuA4 complex
     125669554
  Chromatin remodeling factors
   BAF complex
    125669554
   PBAF complex
    125669554
   GBAF(ncBAF) complex
    125669554
   SWR1 complex
    125669554
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125669554
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125669554
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125669554
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125669554
NCBI-ProteinID: XP_048760099
LinkDB
Position
4:39316960..39327440
AA seq 378 aa
MHFGDLLPILIDNGSGMCKAGFAGDHAPRAVFPPIVGRPRHQGVKMVGMEQMDCCVGDEA
RVKKEILTLNHPIEHGIVTNWDDMEKIWHHIFNNELRVIPEEHPVLLTEAPHNPKSNREK
MTQIMFETFNSPALYVAIQAVLSLYGTGRTNGIVIDSGHDASHSVPIYEGHALPHAVMKL
NLAGRDLTSYLMKILTERGYTFTTAAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
SYELPDGQVITIGNELFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDMNIKDLYATI
VLSGGSTMYPGIADRMQKEITALAPSTMEVEISGAEDRKYSVWIGGVTFASHSTFEQMCI
SKEEYEEYGPSIVYKKCF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgcatttcggagaccttctaccaatacttattgacaatgggtccggaatgtgcaaggct
ggattcgctggagatcatgcgccaagggctgtgtttccacccattgttggacgacccaga
catcaaggtgtcaaaatggtgggcatggaacaaatggactgctgtgttggagatgaagcc
agggttaaaaaagaaatcctcactcttaaccaccccattgaacacggtatcgtcaccaac
tgggacgacatggagaagatctggcatcacatcttcaataatgaactccgtgtgatccca
gaggaacaccccgtcctcttgactgaggccccacacaaccccaagtccaacagggaaaag
atgacacagatcatgtttgaaacctttaactctcccgccctgtatgtcgctatccaggcc
gtactatccctgtacggtaccggtcgcacgaatggtattgtgattgactctggacatgat
gcatctcactcagtacccatttacgaaggtcatgcccttcctcatgcagtgatgaaactg
aatcttgctggacgtgacctaaccagttacctaatgaaaatcctcaccgaacgtggttac
acctttacaactgcagctgaaagagaaatcgtaagagacattaaagagaaattgtgctat
gttgctttggacttcgagcaggagatggcaactgctgcatcctcatcgtccttggagaag
agttatgaacttcctgacggtcaggttatcaccatcggaaacgagctattcaggtgccca
gaggctctgtttcaaccatccttccttggaatggaatctgctggtatccatgaaaccaca
ttcaacagtatcatgaagtgtgatgttgatatgaatataaaagacttgtacgcaaccata
gtattatctggtggttcgactatgtaccctggtattgctgaccgtatgcagaaagaaatc
acagctttagctcccagcacaatggaagtcgagatcagtggcgcagaagataggaaatac
tccgtctggatcggtggtgtcacctttgcttctcactccaccttcgagcagatgtgcatc
agcaaagaggaatatgaggaatatggtccatccattgtatacaaaaaatgtttttaa

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