Ostrea edulis (European flat oyster): 125669554
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Entry
125669554 CDS
T09123
Name
(RefSeq) actin-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04517
IgSF CAM signaling
oed04518
Integrin signaling
oed04519
Cadherin signaling
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125669554
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125669554
04518 Integrin signaling
125669554
04519 Cadherin signaling
125669554
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125669554
09142 Cell motility
04814 Motor proteins
125669554
04820 Cytoskeleton in muscle cells
125669554
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125669554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125669554
03019 Messenger RNA biogenesis [BR:
oed03019
]
125669554
03036 Chromosome and associated proteins [BR:
oed03036
]
125669554
03029 Mitochondrial biogenesis [BR:
oed03029
]
125669554
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125669554
04147 Exosome [BR:
oed04147
]
125669554
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125669554
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125669554
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125669554
NuA4 complex
125669554
Chromatin remodeling factors
BAF complex
125669554
PBAF complex
125669554
GBAF(ncBAF) complex
125669554
SWR1 complex
125669554
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125669554
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125669554
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125669554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125669554
NCBI-ProteinID:
XP_048760099
LinkDB
All DBs
Position
4:39316960..39327440
Genome browser
AA seq
378 aa
AA seq
DB search
MHFGDLLPILIDNGSGMCKAGFAGDHAPRAVFPPIVGRPRHQGVKMVGMEQMDCCVGDEA
RVKKEILTLNHPIEHGIVTNWDDMEKIWHHIFNNELRVIPEEHPVLLTEAPHNPKSNREK
MTQIMFETFNSPALYVAIQAVLSLYGTGRTNGIVIDSGHDASHSVPIYEGHALPHAVMKL
NLAGRDLTSYLMKILTERGYTFTTAAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
SYELPDGQVITIGNELFRCPEALFQPSFLGMESAGIHETTFNSIMKCDVDMNIKDLYATI
VLSGGSTMYPGIADRMQKEITALAPSTMEVEISGAEDRKYSVWIGGVTFASHSTFEQMCI
SKEEYEEYGPSIVYKKCF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcggagaccttctaccaatacttattgacaatgggtccggaatgtgcaaggct
ggattcgctggagatcatgcgccaagggctgtgtttccacccattgttggacgacccaga
catcaaggtgtcaaaatggtgggcatggaacaaatggactgctgtgttggagatgaagcc
agggttaaaaaagaaatcctcactcttaaccaccccattgaacacggtatcgtcaccaac
tgggacgacatggagaagatctggcatcacatcttcaataatgaactccgtgtgatccca
gaggaacaccccgtcctcttgactgaggccccacacaaccccaagtccaacagggaaaag
atgacacagatcatgtttgaaacctttaactctcccgccctgtatgtcgctatccaggcc
gtactatccctgtacggtaccggtcgcacgaatggtattgtgattgactctggacatgat
gcatctcactcagtacccatttacgaaggtcatgcccttcctcatgcagtgatgaaactg
aatcttgctggacgtgacctaaccagttacctaatgaaaatcctcaccgaacgtggttac
acctttacaactgcagctgaaagagaaatcgtaagagacattaaagagaaattgtgctat
gttgctttggacttcgagcaggagatggcaactgctgcatcctcatcgtccttggagaag
agttatgaacttcctgacggtcaggttatcaccatcggaaacgagctattcaggtgccca
gaggctctgtttcaaccatccttccttggaatggaatctgctggtatccatgaaaccaca
ttcaacagtatcatgaagtgtgatgttgatatgaatataaaagacttgtacgcaaccata
gtattatctggtggttcgactatgtaccctggtattgctgaccgtatgcagaaagaaatc
acagctttagctcccagcacaatggaagtcgagatcagtggcgcagaagataggaaatac
tccgtctggatcggtggtgtcacctttgcttctcactccaccttcgagcagatgtgcatc
agcaaagaggaatatgaggaatatggtccatccattgtatacaaaaaatgtttttaa
DBGET
integrated database retrieval system