Ostrea edulis (European flat oyster): 125669557
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Entry
125669557 CDS
T09123
Name
(RefSeq) actin
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125669557
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125669557
09142 Cell motility
04814 Motor proteins
125669557
04820 Cytoskeleton in muscle cells
125669557
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125669557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125669557
03019 Messenger RNA biogenesis [BR:
oed03019
]
125669557
03036 Chromosome and associated proteins [BR:
oed03036
]
125669557
03029 Mitochondrial biogenesis [BR:
oed03029
]
125669557
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125669557
04147 Exosome [BR:
oed04147
]
125669557
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125669557
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125669557
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125669557
NuA4 complex
125669557
Chromatin remodeling factors
BAF complex
125669557
PBAF complex
125669557
GBAF(ncBAF) complex
125669557
SWR1 complex
125669557
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125669557
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125669557
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125669557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125669557
NCBI-ProteinID:
XP_048760103
LinkDB
All DBs
Position
4:39336428..39341088
Genome browser
AA seq
376 aa
AA seq
DB search
MGDEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATSASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgaagacgttgcagctttagttattgataatggatccggaatgtgcaaggcc
ggattcgccggagacgatgcccccagggccgtgttcccctccattgttggacgacctaga
catcagggtgtaatggttggtatgggtcagaaagacagctatgtaggagacgaggcccag
agcaagagaggtattctcaccctcaagtaccccattgaacacggcgtcgtcaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgaactccgtgtggcaccagag
gaacaccccgtcctcctgaccgaggccccactcaaccccaaagccaacagagaaaagatg
acacagatcatgttcgaaaccttcaactctcccgccatgtacgtcgctatccaggccgta
ctttccctgtacgcttccggtcgtacaactggtattgtactggattccggagacggtgtc
acccacacagtacccatctatgaaggttacgcccttccccacgccatcatgcgattggat
ctcgctggacgtgatctgaccgattacctcatgaaaatcctcacagagcgtggttactcc
ttcacaaccacagctgagagagaaatcgtcagagacattaaagagaaattgtgctatgtt
gctttggacttcgaacaggagatggcaacttctgcatcctcatcgtccctggagaagagt
tatgaacttcctgacggtcaggtcatcaccatcggaaacgagcgattcaggtgcccagag
gccatgtttcagccatccttccttggaatggaatcttctggtatccatgaaaccacatac
aacagtatcatgaagtgtgatgtcgatatccgtaaagacttgtacgctaatactgtcttg
tctggtggttcaacgatgtaccctggcattgctgaccgtatgcagaaagaaatcactgct
ctcgcaccaccaacaatgaagatcaagattatcgccccaccagagaggaaatactccgtc
tggatcggtggttccatccttgcttctctctccaccttccaacagatgtggatcagcaaa
caggaatacgatgaatcgggtccatccattgtccacaggaagtgcttctaa
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integrated database retrieval system