KEGG   Ostrea edulis (European flat oyster): 125669557
Entry
125669557         CDS       T09123                                 
Name
(RefSeq) actin
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125669557
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125669557
  09142 Cell motility
   04814 Motor proteins
    125669557
   04820 Cytoskeleton in muscle cells
    125669557
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125669557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125669557
   03019 Messenger RNA biogenesis [BR:oed03019]
    125669557
   03036 Chromosome and associated proteins [BR:oed03036]
    125669557
   03029 Mitochondrial biogenesis [BR:oed03029]
    125669557
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125669557
   04147 Exosome [BR:oed04147]
    125669557
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125669557
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125669557
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125669557
    NuA4 complex
     125669557
  Chromatin remodeling factors
   BAF complex
    125669557
   PBAF complex
    125669557
   GBAF(ncBAF) complex
    125669557
   SWR1 complex
    125669557
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125669557
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125669557
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125669557
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125669557
NCBI-ProteinID: XP_048760103
LinkDB
Position
4:39336428..39341088
AA seq 376 aa
MGDEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATSASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgggtgacgaagacgttgcagctttagttattgataatggatccggaatgtgcaaggcc
ggattcgccggagacgatgcccccagggccgtgttcccctccattgttggacgacctaga
catcagggtgtaatggttggtatgggtcagaaagacagctatgtaggagacgaggcccag
agcaagagaggtattctcaccctcaagtaccccattgaacacggcgtcgtcaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgaactccgtgtggcaccagag
gaacaccccgtcctcctgaccgaggccccactcaaccccaaagccaacagagaaaagatg
acacagatcatgttcgaaaccttcaactctcccgccatgtacgtcgctatccaggccgta
ctttccctgtacgcttccggtcgtacaactggtattgtactggattccggagacggtgtc
acccacacagtacccatctatgaaggttacgcccttccccacgccatcatgcgattggat
ctcgctggacgtgatctgaccgattacctcatgaaaatcctcacagagcgtggttactcc
ttcacaaccacagctgagagagaaatcgtcagagacattaaagagaaattgtgctatgtt
gctttggacttcgaacaggagatggcaacttctgcatcctcatcgtccctggagaagagt
tatgaacttcctgacggtcaggtcatcaccatcggaaacgagcgattcaggtgcccagag
gccatgtttcagccatccttccttggaatggaatcttctggtatccatgaaaccacatac
aacagtatcatgaagtgtgatgtcgatatccgtaaagacttgtacgctaatactgtcttg
tctggtggttcaacgatgtaccctggcattgctgaccgtatgcagaaagaaatcactgct
ctcgcaccaccaacaatgaagatcaagattatcgccccaccagagaggaaatactccgtc
tggatcggtggttccatccttgcttctctctccaccttccaacagatgtggatcagcaaa
caggaatacgatgaatcgggtccatccattgtccacaggaagtgcttctaa

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