Ostrea edulis (European flat oyster): 125669558
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Entry
125669558 CDS
T09123
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125669558
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125669558
09142 Cell motility
04814 Motor proteins
125669558
04820 Cytoskeleton in muscle cells
125669558
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125669558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125669558
03019 Messenger RNA biogenesis [BR:
oed03019
]
125669558
03036 Chromosome and associated proteins [BR:
oed03036
]
125669558
03029 Mitochondrial biogenesis [BR:
oed03029
]
125669558
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125669558
04147 Exosome [BR:
oed04147
]
125669558
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125669558
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125669558
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125669558
NuA4 complex
125669558
Chromatin remodeling factors
BAF complex
125669558
PBAF complex
125669558
GBAF(ncBAF) complex
125669558
SWR1 complex
125669558
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125669558
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125669558
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125669558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
125669558
NCBI-ProteinID:
XP_048760105
LinkDB
All DBs
Position
4:complement(39196412..39198573)
Genome browser
AA seq
376 aa
AA seq
DB search
MDDDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMQTAASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatgatgttgcagctttagttattgataatggatccggaatgtgcaaggcc
ggattcgccggagatgatgcccccagggccgtgtttccctccattgttggtcgacccaga
catcagggtgtaatggttggtatgggacagaaagacagctatgtaggagacgaggcccag
agcaagagaggtatcctcaccctcaagtaccccattgaacacggtatcgtcaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgaactccgtgtggccccagag
gaacaccccgtcctcctgaccgaggccccacttaaccccaaggccaacagagaaaagatg
acacagattatgttcgaaaccttcaactctcccgccatgtacgtcgctatccaggccgta
ctttccctgtacgcttccggtcgtacaactggtattgtactggattccggagacggagta
tctcacacagtacccatctatgaaggttacgcccttccccacgccatcatgcgattggat
ctcgctggacgtgatctgaccgattacctcatgaaaatcctaacagaacgtggttactcc
ttcacaaccacagctgaaagagaaatcgtcagagacattaaagagaaattatgctatgtt
gctctggactttgaaaatgaaatgcaaactgctgcatcctcatcgtccttggagaagagt
tacgaacttccggacggtcaggttattaccattggaaacgagcgattcaggtgcccagag
gccatgtttcaaccatctttccttggaatggaatcttctggtatccatgaaaccacatac
aacagtatcatgaagtgtgatgttgatatccgtaaagacttgtacgcaaacacagtatta
tctggtggttcaaccatgtaccctggtattgctgaccgtatgcagaaagaaatcacagct
ttagctcctagcacaatgaaaattaagatcattgccccaccagagaggaaatactccgtc
tggatcggtggttccatccttgcttctctctccaccttccaacagatgtggatcagcaaa
caggaatacgatgaatcgggtccatccattgtccacaggaagtgcttttaa
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