KEGG   Ostrea edulis (European flat oyster): 125669558
Entry
125669558         CDS       T09123                                 
Name
(RefSeq) actin, cytoplasmic-like
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125669558
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125669558
  09142 Cell motility
   04814 Motor proteins
    125669558
   04820 Cytoskeleton in muscle cells
    125669558
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125669558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125669558
   03019 Messenger RNA biogenesis [BR:oed03019]
    125669558
   03036 Chromosome and associated proteins [BR:oed03036]
    125669558
   03029 Mitochondrial biogenesis [BR:oed03029]
    125669558
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125669558
   04147 Exosome [BR:oed04147]
    125669558
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125669558
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125669558
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125669558
    NuA4 complex
     125669558
  Chromatin remodeling factors
   BAF complex
    125669558
   PBAF complex
    125669558
   GBAF(ncBAF) complex
    125669558
   SWR1 complex
    125669558
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125669558
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125669558
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125669558
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 125669558
NCBI-ProteinID: XP_048760105
LinkDB
Position
4:complement(39196412..39198573)
AA seq 376 aa
MDDDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMQTAASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggatgacgatgatgttgcagctttagttattgataatggatccggaatgtgcaaggcc
ggattcgccggagatgatgcccccagggccgtgtttccctccattgttggtcgacccaga
catcagggtgtaatggttggtatgggacagaaagacagctatgtaggagacgaggcccag
agcaagagaggtatcctcaccctcaagtaccccattgaacacggtatcgtcaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgaactccgtgtggccccagag
gaacaccccgtcctcctgaccgaggccccacttaaccccaaggccaacagagaaaagatg
acacagattatgttcgaaaccttcaactctcccgccatgtacgtcgctatccaggccgta
ctttccctgtacgcttccggtcgtacaactggtattgtactggattccggagacggagta
tctcacacagtacccatctatgaaggttacgcccttccccacgccatcatgcgattggat
ctcgctggacgtgatctgaccgattacctcatgaaaatcctaacagaacgtggttactcc
ttcacaaccacagctgaaagagaaatcgtcagagacattaaagagaaattatgctatgtt
gctctggactttgaaaatgaaatgcaaactgctgcatcctcatcgtccttggagaagagt
tacgaacttccggacggtcaggttattaccattggaaacgagcgattcaggtgcccagag
gccatgtttcaaccatctttccttggaatggaatcttctggtatccatgaaaccacatac
aacagtatcatgaagtgtgatgttgatatccgtaaagacttgtacgcaaacacagtatta
tctggtggttcaaccatgtaccctggtattgctgaccgtatgcagaaagaaatcacagct
ttagctcctagcacaatgaaaattaagatcattgccccaccagagaggaaatactccgtc
tggatcggtggttccatccttgcttctctctccaccttccaacagatgtggatcagcaaa
caggaatacgatgaatcgggtccatccattgtccacaggaagtgcttttaa

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