KEGG   Ostrea edulis (European flat oyster): 125671426
Entry
125671426         CDS       T09123                                 
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed00052  Galactose metabolism
oed00510  N-Glycan biosynthesis
oed00513  Various types of N-glycan biosynthesis
oed00514  Other types of O-glycan biosynthesis
oed00515  Mannose type O-glycan biosynthesis
oed00533  Glycosaminoglycan biosynthesis - keratan sulfate
oed00601  Glycosphingolipid biosynthesis - lacto and neolacto series
oed01100  Metabolic pathways
Module
oed_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:oed00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    125671426
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    125671426
   00513 Various types of N-glycan biosynthesis
    125671426
   00515 Mannose type O-glycan biosynthesis
    125671426
   00514 Other types of O-glycan biosynthesis
    125671426
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    125671426
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    125671426
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:oed01003]
    125671426
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oed04131]
    125671426
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oed04147]
    125671426
Enzymes [BR:oed01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     125671426
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     125671426
    2.4.1.90  N-acetyllactosamine synthase
     125671426
Glycosyltransferases [BR:oed01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   125671426
Membrane trafficking [BR:oed04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    125671426
Exosome [BR:oed04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   125671426
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C CHGN USA1_Ub-like Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 125671426
NCBI-ProteinID: XP_048763122
LinkDB
Position
4:2202965..2216429
AA seq 291 aa
MCPLIPPELVGDIPVNKYPLNWTVIESRYKTVVNGSHRPEKCTARHKVALLIPYRNRARH
LRIFLNHMHAFLIKQQLDYGIYIVEIDEDIPFNRGFLFNVGFKEASSDYSYDCFIFHDVD
LLPQNDHNLYNCPDQPRHLSVAIDKFMYKLAYSTNFGGVSAMTKEQFTTVNGFSNFFFGW
GGEDDDLYNRLVYHKMTISRTMSDVARYTMLSHKQATRNPQRIKLLRSGKQRMQTDGINS
LEYKVLQKIHRKLYVHVTVTLEESALRPFKKFSLSGNTTIFRRSAANFDLS
NT seq 876 nt   +upstreamnt  +downstreamnt
atgtgtcccctcattcctccagaattagttggggatattcctgtgaacaaatatccattg
aattggacggtcatcgaaagcagatacaagacagtggtcaacggtagtcatcgtcctgag
aagtgcactgcccgccataaagtagccctcctcattccatatcggaacagagcccgacat
cttagaatatttcttaaccacatgcacgcctttctcattaagcagcagttggattatgga
atatatattgtggaaattgatgaagacatcccattcaacagagggttcctgtttaatgta
ggctttaaggaggccagcagtgattacagctacgattgttttatattccatgacgtagac
ttgcttcctcagaacgatcataacttgtacaattgtccagatcagcctagacacctgtct
gtcgccatcgacaaattcatgtacaagcttgcatactctactaattttggcggggtatct
gcaatgacaaaagagcagttcacaacagttaatggtttctcaaacttcttctttggatgg
ggaggcgaagatgatgatttgtataatagacttgtctaccacaagatgacgatatctagg
accatgagtgatgtagctaggtacaccatgctctcgcacaaacaagcgacaaggaaccca
cagaggataaaacttttaagatctggaaaacaacgcatgcaaaccgacggaataaattct
ttagagtacaaagtattacagaagatccacaggaagttatatgttcatgtgacagtcact
ttagaagaatcagctttgcgacccttcaagaagttttcacttagtggaaacaccaccatc
tttaggcgaagtgcagcgaattttgacctcagctag

DBGET integrated database retrieval system