Ostrea edulis (European flat oyster): 125672087
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Entry
125672087 CDS
T09123
Name
(RefSeq) actin-5-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125672087
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125672087
09142 Cell motility
04814 Motor proteins
125672087
04820 Cytoskeleton in muscle cells
125672087
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125672087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125672087
03019 Messenger RNA biogenesis [BR:
oed03019
]
125672087
03036 Chromosome and associated proteins [BR:
oed03036
]
125672087
03029 Mitochondrial biogenesis [BR:
oed03029
]
125672087
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125672087
04147 Exosome [BR:
oed04147
]
125672087
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125672087
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125672087
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125672087
NuA4 complex
125672087
Chromatin remodeling factors
BAF complex
125672087
PBAF complex
125672087
GBAF(ncBAF) complex
125672087
SWR1 complex
125672087
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125672087
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125672087
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125672087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
GerD
Motif
Other DBs
NCBI-GeneID:
125672087
NCBI-ProteinID:
XP_048764153
LinkDB
All DBs
Position
4:63025540..63027835
Genome browser
AA seq
387 aa
AA seq
DB search
MQGCPHGVVKMADSDEIAALVIDNGSGMCKAGFGGDDAPRCVFPSIIGRPRHQGVMIGMG
QKDSYVGEEAQSKRGILTLKYPIEHGIVTNWDDMEKVWHHTFYNELRVAPEEHPVLLTEA
PMNPKANREKMLQIMFETFNTPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG
YALPHAIMRVDLAGRDLTDYMMKIMTERGYSFTTTAEREIVRDIKEKLCYVALDFDDDMM
KSATSSVLEKNYELPDGQVITIGNERFRCPEALFQPSFIGMESTGIHEATYDSIMKCDVD
IRKDLYSNIVLSGGSTMFPGIGDRMSQEIACLAPQNIKVKVVAPPERKYSVWIGGSILAS
LSTFQQMWISKQEYDESGPGIVHRKCF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcagggatgtcctcacggtgtggttaagatggctgattccgatgaaatagcggctctg
gtgatcgacaatggctctgggatgtgtaaggctggatttggaggggacgatgctcctcgc
tgcgtgttcccctccattatagggaggccacggcaccagggcgtaatgattggaatgggg
cagaaggacagctacgttggcgaggaggcgcagtccaaacgaggcatcctcactctcaag
taccccatagagcatggcatcgttacgaactgggatgacatggaaaaagtatggcaccac
accttctacaacgagttgcgagtggcacctgaagagcacccagtccttctaacagaggct
ccaatgaatccgaaggcaaaccgagagaagatgctacaaattatgttcgagaccttcaat
acgcctgccttttacgtctccattcaggccgtgttatcgttgtatgcttccggtagaaca
accggaattgtcctcgattcgggtgatggtgtcacccacacggtgccaatctatgaaggt
tacgcccttccacatgccataatgagggtggacttagcgggacgggatttgaccgattat
atgatgaagatcatgacggagcgcggctattcgttcacaaccactgcagaaagggaaatt
gttcgggatatcaaagaaaagctttgctatgtggcgctagacttcgatgacgatatgatg
aaatcggctacaagttccgtccttgaaaaaaactatgaacttcctgacggtcaggtcatc
accattggcaacgagcgcttccgttgtccagaggcattgttccaaccatccttcattggc
atggaaagtacaggtatccatgaggcaacctacgattccatcatgaaatgtgatgttgat
atcagaaaagatctgtactccaacatcgttctctcaggagggtcaactatgttcccaggg
atcggggatagaatgagtcaggagattgcatgccttgctcctcaaaatatcaaggttaag
gttgtggcaccaccagagcggaagtattctgtgtggataggcgggtcgatattggcttcg
ttatccactttccagcaaatgtggatcagcaaacaagagtatgacgaaagtgggccaggg
atcgtgcataggaaatgtttctaa
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integrated database retrieval system