Ostrea edulis (European flat oyster): 125672088
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Entry
125672088 CDS
T09123
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125672088
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125672088
09142 Cell motility
04814 Motor proteins
125672088
04820 Cytoskeleton in muscle cells
125672088
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125672088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125672088
03019 Messenger RNA biogenesis [BR:
oed03019
]
125672088
03036 Chromosome and associated proteins [BR:
oed03036
]
125672088
03029 Mitochondrial biogenesis [BR:
oed03029
]
125672088
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125672088
04147 Exosome [BR:
oed04147
]
125672088
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125672088
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125672088
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125672088
NuA4 complex
125672088
Chromatin remodeling factors
BAF complex
125672088
PBAF complex
125672088
GBAF(ncBAF) complex
125672088
SWR1 complex
125672088
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125672088
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125672088
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125672088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125672088
NCBI-ProteinID:
XP_048764155
LinkDB
All DBs
Position
4:complement(63019460..63024680)
Genome browser
AA seq
375 aa
AA seq
DB search
MSDEVAAIVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMT
QIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTGYLVKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMVTAASTSSLEKSY
ELPDGQVITIGNERFRCPEAFYQPAFLGMEASGIHETAYNSIMKCDVDIRRDLYANTVLS
GGSTMFPGMADRMQKEMTALAPSTMKIKIIAPPERKYSVWIGGSILSSLSTFQQMWISKQ
EYDESGPSVVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaagttgctgcaattgttattgataatggatcggggatgtgtaaagctgga
ttcgccggcgatgatgccccacgagccgtgtttccatctattgtgggacgacccaggcat
cagggagtgatggttggtatgggtcaaaaggacagttacgtaggagatgaagcccagagc
aagagaggtatcctcactctacgataccccatagagcacgggatcgtgacaaactgggac
gacatggagaaaatctggcatcatactttttacaatgaactacgagtagcgcccgaagag
caccctgcattattgactgaggcaccattgaatcccaaagccaaccgcgagaagatgacc
cagatcatgttcgaaacgttcaactctcccgccatgtatgtaggtatccaggccgtgcta
tccctctatgcttccgggagaactacaggtatagttatggactcaggagacggagtgtct
catacggttcctatctatgaaggatacgcccttcctcatgccatccttcgtttggactta
gctggacgagatttaacaggatacctcgtgaagattctgacagagcgaggctattctttc
accacgacagctgagcgggaaattgtccgcgacatcaaagagaaacttagctacgtagct
ctggacttcgagcaggaaatggtaactgctgcttcgacttcatctctagagaaaagctac
gagctacccgacggacaagtcatcaccattggcaatgagagattccgctgtccggaagct
ttttaccagcccgcatttttgggaatggaagcatccggtattcacgaaacggcgtacaac
tccatcatgaagtgcgacgtcgacatccgacgagacctatatgccaacactgtattatct
ggtggatctactatgttcccaggaatggccgatcgcatgcagaaagaaatgaccgcacta
gcgcctagcaccatgaaaatcaagatcatcgctcccccagaaaggaaatactcggtatgg
atcggcggatccatcctttcttcactatctacctttcagcaaatgtggatcagcaagcag
gagtacgatgaaagcggtccaagtgtagtccacaggaaatgcttttag
DBGET
integrated database retrieval system