KEGG   Ostrea edulis (European flat oyster): 125672088
Entry
125672088         CDS       T09123                                 
Name
(RefSeq) actin, cytoplasmic-like
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125672088
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125672088
  09142 Cell motility
   04814 Motor proteins
    125672088
   04820 Cytoskeleton in muscle cells
    125672088
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125672088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125672088
   03019 Messenger RNA biogenesis [BR:oed03019]
    125672088
   03036 Chromosome and associated proteins [BR:oed03036]
    125672088
   03029 Mitochondrial biogenesis [BR:oed03029]
    125672088
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125672088
   04147 Exosome [BR:oed04147]
    125672088
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125672088
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125672088
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125672088
    NuA4 complex
     125672088
  Chromatin remodeling factors
   BAF complex
    125672088
   PBAF complex
    125672088
   GBAF(ncBAF) complex
    125672088
   SWR1 complex
    125672088
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125672088
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125672088
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125672088
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125672088
NCBI-ProteinID: XP_048764155
LinkDB
Position
4:complement(63019460..63024680)
AA seq 375 aa
MSDEVAAIVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMT
QIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTGYLVKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMVTAASTSSLEKSY
ELPDGQVITIGNERFRCPEAFYQPAFLGMEASGIHETAYNSIMKCDVDIRRDLYANTVLS
GGSTMFPGMADRMQKEMTALAPSTMKIKIIAPPERKYSVWIGGSILSSLSTFQQMWISKQ
EYDESGPSVVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgagtgacgaagttgctgcaattgttattgataatggatcggggatgtgtaaagctgga
ttcgccggcgatgatgccccacgagccgtgtttccatctattgtgggacgacccaggcat
cagggagtgatggttggtatgggtcaaaaggacagttacgtaggagatgaagcccagagc
aagagaggtatcctcactctacgataccccatagagcacgggatcgtgacaaactgggac
gacatggagaaaatctggcatcatactttttacaatgaactacgagtagcgcccgaagag
caccctgcattattgactgaggcaccattgaatcccaaagccaaccgcgagaagatgacc
cagatcatgttcgaaacgttcaactctcccgccatgtatgtaggtatccaggccgtgcta
tccctctatgcttccgggagaactacaggtatagttatggactcaggagacggagtgtct
catacggttcctatctatgaaggatacgcccttcctcatgccatccttcgtttggactta
gctggacgagatttaacaggatacctcgtgaagattctgacagagcgaggctattctttc
accacgacagctgagcgggaaattgtccgcgacatcaaagagaaacttagctacgtagct
ctggacttcgagcaggaaatggtaactgctgcttcgacttcatctctagagaaaagctac
gagctacccgacggacaagtcatcaccattggcaatgagagattccgctgtccggaagct
ttttaccagcccgcatttttgggaatggaagcatccggtattcacgaaacggcgtacaac
tccatcatgaagtgcgacgtcgacatccgacgagacctatatgccaacactgtattatct
ggtggatctactatgttcccaggaatggccgatcgcatgcagaaagaaatgaccgcacta
gcgcctagcaccatgaaaatcaagatcatcgctcccccagaaaggaaatactcggtatgg
atcggcggatccatcctttcttcactatctacctttcagcaaatgtggatcagcaagcag
gagtacgatgaaagcggtccaagtgtagtccacaggaaatgcttttag

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