Ostrea edulis (European flat oyster): 125678257
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Entry
125678257 CDS
T09123
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125678257
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125678257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125678257
04121 Ubiquitin system [BR:
oed04121
]
125678257
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125678257
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125678257
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125678257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-RING_UBOX
TRAF2_zf
zf-C3HC4_2
zf-C3HC4_4
TRAF_BIRC3_bd
CEP104_ZnF
Sina_ZnF
zf-RING_6
ATG16
PdaC
Histone_HNS_N
zf_C2H2_13
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
125678257
NCBI-ProteinID:
XP_048772510
LinkDB
All DBs
Position
2:complement(30228545..30242466)
Genome browser
AA seq
522 aa
AA seq
DB search
MSEVGIHEGGYPTKIFKNGFDSKVLCNTCNKVLRDPVQSYCGHRFCKECISVVISSGNQI
QCKSCIEEGVDNEDYSIIRKDQLFPDNALRREMFSLEANCPNPGCSWTGKFRDYEKHANE
CKYRPVLCPNCGESVEVNKMKTHLENACPRRKLKCKYCSLDITQDQMAQHTKDCPKQPVK
CESCGKKKIAREMLQDHKNTECPNQSIACMAGCEAVERRRFLSHIEEKPGFHIQKIMKAV
EEIRELVTTEVSKKELARLNGNIEAGQQTGESGASSGNVEQSPNGSDQQNSTKVTALEIK
VRTFEGIATTLHRETERILNVLDENKKEIEDAKKLNEEKTRKIMELEKKLANSDVQVTQL
TQRLLSCEVASYNGELVWRLDNWKEHREKAVSGVITSIFSPPFYTSKYGYKMCVRIYPNG
DGMGKNTHVSIFFAIMRGEYDPILDWPFSRRIVFTVHDQNGENHIKDSFRTDPNSSSFKC
PTTDMNIASGCPLFLPLTRLQGNNGFVKNNVIYIKTKVEEIR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggttggtatacatgaagggggatacccaacaaaaatattcaaaaatggattc
gactccaaagttctgtgcaacacgtgtaacaaagtcctacgagacccggtccagagctac
tgtggtcacaggttctgcaaggaatgtatttccgtcgttatcagttctggaaaccagatc
cagtgtaagtcgtgtatagaggagggcgtggacaacgaagactacagcatcatcaggaaa
gaccagctttttcctgataatgcattgcgaagagaaatgtttagtttggaagcaaattgt
cccaatccgggctgttcgtggacaggaaaattcagagattatgagaaacacgcaaatgaa
tgtaaataccgccccgtgttatgtccaaactgtggcgagtcggtggaagtgaataaaatg
aaaactcacctggaaaatgcatgccctagaaggaaattgaaatgcaaatattgctccttg
gacatcactcaggatcaaatggcgcaacacacgaaagattgtccgaaacaaccagtgaag
tgcgaaagttgtgggaaaaagaaaatagcgcgggaaatgttgcaggatcataaaaatacc
gaatgtccaaatcagagcatagcttgcatggcaggctgtgaagcggttgaacgacggcgg
tttcttagtcatattgaggagaaacctggattccatatccaaaaaataatgaaagcagta
gaggaaattagagaactggttaccacagaggtttccaagaaagaattagcgcggttaaat
ggaaacattgaagccggtcagcagacaggagaaagcggtgcgtcgtctggaaacgtggaa
caatcgcccaatggaagcgaccaacaaaacagtacaaaggtcactgcattagaaattaaa
gtgaggacttttgaagggattgccaccactctacacagagagacagaacgaattttaaat
gtcttggatgaaaataagaaggaaattgaagatgccaagaaactgaatgaagaaaaaaca
cggaaaatcatggagttagaaaagaaactggcgaatagtgatgttcaagttacacaacta
acgcagagattgctttcgtgtgaagtggcttcatacaatggcgaattagtatggcgactg
gacaactggaaagagcatcgagaaaaggccgtttcgggagtgatcactagcatcttttcc
ccaccattttatacttctaagtatggctacaaaatgtgtgtaagaatatatccaaatgga
gatggcatgggaaagaatacccacgtgtcaatattcttcgccatcatgagaggagaatat
gatcctatcttggactggcctttctcacgccgaattgttttcacagtgcatgatcagaat
ggtgaaaatcacatcaaagattcttttcgaacagacccgaacagttcttcattcaaatgt
ccaacaacagatatgaacattgccagcggatgtccgttgtttttgccactaacacgtctt
caaggcaacaatggttttgtgaaaaataatgtcatatacatcaaaacaaaagtggaggaa
attcgctga
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