Ostrea edulis (European flat oyster): 125678595
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Entry
125678595 CDS
T09123
Name
(RefSeq) actin, adductor muscle
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125678595
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125678595
09142 Cell motility
04814 Motor proteins
125678595
04820 Cytoskeleton in muscle cells
125678595
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125678595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125678595
03019 Messenger RNA biogenesis [BR:
oed03019
]
125678595
03036 Chromosome and associated proteins [BR:
oed03036
]
125678595
03029 Mitochondrial biogenesis [BR:
oed03029
]
125678595
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
125678595
04147 Exosome [BR:
oed04147
]
125678595
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125678595
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125678595
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125678595
NuA4 complex
125678595
Chromatin remodeling factors
BAF complex
125678595
PBAF complex
125678595
GBAF(ncBAF) complex
125678595
SWR1 complex
125678595
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125678595
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125678595
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
125678595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125678595
NCBI-ProteinID:
XP_048773119
LinkDB
All DBs
Position
2:87139314..87142223
Genome browser
AA seq
376 aa
AA seq
DB search
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgaagtagcagctttggttgtggacaatggatccggaatgtgcaaggcc
ggtttcgccggagatgatgctccaagagctgtattcccttctattgtcggaagacctaga
catcagggagtcatggttggtatgggtcagaaagacagctatgtgggagatgaagcccag
agcaagagaggtatcctcaccctgaagtaccccattgaacacggtatcgtcacaaactgg
gacgatatggagaagatctggcatcacacattctacaatgaacttcgtgtcgcacccgaa
gaacaccccgtcctgcttactgaggctcccctcaaccccaaggccaacagagaaaagatg
acacagatcatgttcgagaccttcaacgctcccgccatgtacgtcgccatccaggccgtg
ctgtccctgtacgcttccggtcgtaccactggtatcgtactcgactccggtgatggtgtc
acccacactgtccccatctacgaaggttacgcccttccccacgctatccttcgtctggat
ttggctggtcgtgatcttactgactacctcatgaagatcctcaccgaacgtggttattca
ttcacaaccaccgccgagagagagatcgttagagacatcaaggagaaactctgctatgtc
gccctcgacttcgagcaggaaatggccaccgccgcttcctcttcctccctcgagaagagc
tacgagcttcccgacggtcaggtcatcaccattggtaacgagagattccgttgcccagag
tcactcttccagccatccttcttgggtatggaatctgctggtatccatgaaaccacctac
aattccatcatgaagtgcgacgtcgacatccgtaaggatctgtacgccaacactgtcctc
tccggaggtaccaccatgttcccaggtattgctgaccgcatgcagaaggaaatcaccgct
cttgctccaagcaccatgaagatcaagatcattgccccaccagagaggaaatactccgtc
tggatcggtggttccatcttggcttccctgtccaccttccaacagatgtggatcagcaag
caggagtacgacgagtccggtccttccatcgtccacaggaaatgcttctaa
DBGET
integrated database retrieval system