Ostrea edulis (European flat oyster): 125679191
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Entry
125679191 CDS
T09123
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125679191
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125679191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125679191
04121 Ubiquitin system [BR:
oed04121
]
125679191
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125679191
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125679191
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125679191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
CEP104_ZnF
zf-RING_UBOX
zf-C3HC4_2
ALIX_LYPXL_bnd
TRAF2_zf
CENP-O
DUF892
PAS_10
FTR
Fez1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
125679191
NCBI-ProteinID:
XP_056011331
LinkDB
All DBs
Position
2:complement(88548520..88573136)
Genome browser
AA seq
544 aa
AA seq
DB search
MASQQGIGGYPVEIFKSEKFDRKFLCNHCSLILRDPVQSYCGHRFCRSCMESVIRSNEQV
RCQSCIEEGTLDEEYSILKMDQMFPDNAVRREMGAMHTKCINPKCTWEGTFKQYEGHMAE
CKFKPVPCQQCGNLIEPQALQDHMTKDCPKRRMTCKHCQSDITVEEMEKHNAECPKYPIK
CDSCGKKKIQRDKMKHHLERECSNQKVPCLQECGEISRDKFVDHLDRRPGIHIQALVDQL
NSLQTEVNSRLQSVIVQSDLGQFVSHITELKQKVQQQEQLIQTIQASGQGQSGASGSMVE
SETNVMRQKVQTLELKTGTFEGIVTTLHREIERCITAIENVERNRQADKQMIENQEKKIR
ALERNISLKDVALAEQELRIKTLELTTYDGTLIWKISEWSKRRSEAQSNQVTSLYSPIFY
SSKNGYKMCARLYPNGDGMGKNTHMSIFFVVMRGNFDALLQWPFSFRVTFMLLDQNNKEH
QVDSFRPDPNSSSFKRPTTEMNIASGCPLFIPLSKLDDPSLAYVKEDTMFIKLIVDVHAT
EARR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaacagggtataggaggctacccagtggaaatattcaagagtgaaaaattt
gacagaaaatttttatgcaaccactgcagtttaatattaagagacccagtacagagctat
tgtggtcacagattctgtcgctcatgtatggagagtgttattaggtccaatgagcaggtt
agatgtcagtcatgtattgaggaagggactttggatgaagagtacagcatactgaagatg
gatcagatgtttcctgacaatgctgtaaggagggaaatgggtgctatgcatactaagtgc
attaatccaaaatgtacttgggaaggaaccttcaagcaatatgagggtcacatggcagaa
tgtaagtttaaaccagttccctgtcaacaatgtgggaatttgattgagccccaggctctg
caggatcacatgaccaaggattgtccaaaaaggaggatgacttgtaaacattgtcagtca
gatatcactgtcgaggaaatggagaaacataatgcagaatgtcccaagtacccaattaaa
tgtgactcttgtggcaaaaagaagatacagagagacaagatgaagcaccacttagagagg
gagtgctccaaccagaaagttccttgtctacaagaatgtggtgagatcagcagagataag
tttgttgatcatctggacaggagacctggtatacacatccaagccctagtagaccaactg
aatagtttacaaactgaggtcaactcaagactccaatctgtcattgtccagagtgacctt
ggtcagtttgtttcacacatcactgaactcaaacagaaggttcaacaacaggaacaactg
attcaaaccatacaggcttcaggtcaaggtcagtcaggggcgagtggttcaatggtggaa
tctgagacaaatgtaatgaggcaaaaagttcagacgctggagttaaagacaggtacattc
gaaggcattgtcaccactctacacagagaaattgagcgttgtattactgcaatagagaac
gtagagagaaacagacaagcagacaaacaaatgatagaaaaccaggagaagaaaatcagg
gctctggaacggaacatctctctcaaggatgtcgctctggcagaacaggaactgagaata
aaaacgttggagctgacgacgtatgatgggacacttatctggaagatttcggagtggagc
aaacgtcgatcggaggcccagagtaaccaggtcacaagcttgtactccccaatcttctac
tccagtaaaaacggatacaagatgtgtgccaggctgtatcccaatggagatggaatgggc
aaaaatacccacatgtccatcttctttgttgtcatgagaggtaactttgacgcccttctc
cagtggccgttctcattccgtgtgacatttatgcttttggatcagaataacaaggaacac
caggtggattcctttcgacctgatcctaacagcagctccttcaaacgccccaccacggag
atgaacatcgccagcggatgccccctgtttatccctctcagcaaactagatgacccgagt
ctggcttatgtcaaagaggacactatgtttatcaaactgattgtagatgtacatgcaaca
gaagcacgcagataa
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integrated database retrieval system
