KEGG   Ostrea edulis (European flat oyster): 125680777
Entry
125680777         CDS       T09123                                 
Name
(RefSeq) actin-5-like
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125680777
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125680777
  09142 Cell motility
   04814 Motor proteins
    125680777
   04820 Cytoskeleton in muscle cells
    125680777
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125680777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    125680777
   03019 Messenger RNA biogenesis [BR:oed03019]
    125680777
   03036 Chromosome and associated proteins [BR:oed03036]
    125680777
   03029 Mitochondrial biogenesis [BR:oed03029]
    125680777
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    125680777
   04147 Exosome [BR:oed04147]
    125680777
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125680777
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125680777
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125680777
    NuA4 complex
     125680777
  Chromatin remodeling factors
   BAF complex
    125680777
   PBAF complex
    125680777
   GBAF(ncBAF) complex
    125680777
   SWR1 complex
    125680777
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125680777
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125680777
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   125680777
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125680777
NCBI-ProteinID: XP_048776502
LinkDB
Position
2:39445207..39449343
AA seq 376 aa
MVDGDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIIGRPRHHGVMVGMGQKDSYIGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQILFETFNSPAMYVSIQAVLSLYGAGRTTGIVLDSGDGVSHTVPIYEGYSLPHAIMRLD
LAGRDLTDYLMKILTERGYSFVNTAEREIVRDIKEKLCYVALDFEQEMATSTSSSSMEKS
YELPDGQVITIGNERFRCPEALFQPAFLGMESSGIHETTYNSIMKCDVDIRKELYSNTVL
SGGSTMYPGIADRMQKEITALAPSTMKIRIIAPPERKYSVWIGGSILASLSTFQQMWINK
QEYDESGPAIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggttgatggcgatattgctgcgttagttattgacaatgggtccggaatgtgcaaggcc
ggattcgccggagacgatgcccccagggccgtgtttccttctattattggacgtccaaga
catcacggtgtcatggttggcatgggtcagaaggacagctatataggagacgaggcccag
agcaagagaggaatcctcaccctcaagtaccccattgaacacggtatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaatgaactccgtgtggcccccgag
gaacaccccgtcctcctgaccgaggccccactcaatcccaaagccaacagagaaaagatg
acacagatcttgttcgaaactttcaactctcccgccatgtatgtttctatccaggccgta
ctttcactatatggtgctggtcgtacaactggcatagtgctcgactctggagacggtgta
tctcacacagttcccatctacgaaggttactcccttccccacgccatcatgagactagat
ctcgccggacgtgatctgaccgattacctcatgaagattctcacagaacgtggttactct
ttcgtaaatacagcggaaagagaaattgtcagagacatcaaagagaagttgtgctatgtt
gctttggacttcgaacaagaaatggcgacttctacgtcttcatcgtccatggagaagagc
tacgaacttccagacggtcaggtcatcaccattggtaacgagcgttttaggtgtccagag
gcgttgtttcaacctgcttttcttggaatggaatcttctggtatccatgaaaccacatac
aacagtatcatgaagtgtgatgtcgatatccgcaaagaattgtactcgaacacggtatta
tctggtggttcaaccatgtaccctggtattgctgatcgtatgcaaaaagaaatcacagct
ttagctcctagcacaatgaagattaggatcattgccccaccagagaggaaatattccgtc
tggatcggtggttccatccttgcttctctgtccaccttccagcagatgtggatcaataaa
caagagtacgacgaatctggtccagctattgtccacaggaagtgcttctaa

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