Ostrea edulis (European flat oyster): 125683018
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Entry
125683018 CDS
T09123
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member-like 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oed04040
]
125683018
Enzymes [BR:
oed01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
125683018
Ion channels [BR:
oed04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125683018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
NUDIX
LDcluster4
DUF2303
Motif
Other DBs
NCBI-GeneID:
125683018
NCBI-ProteinID:
XP_048779657
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Position
6:21464128..21585977
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AA seq
1689 aa
AA seq
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MEKKVTRVSPAARTDTISYENAGTPSHNKSMISLHYNEEAVDAEVVGAAPVETMTFEQRW
IRDNIKMRVCKKFVEKSMEVNSDLLPPLRGLERGSSRVQSENETICRCGYLKSAHPPSLS
SSGSSGLEDWKVDTHTKSTRTNAFGTVEFLGFGENERNYVRVDVNTKMEDMMELMMDVWG
LEKPNLLISVTGGAKNFTMKQKIKEEFRRGLMKVARSTGAWIITGGTNAGVMKHVGEAVR
DYGLVSASTNPIIVIGVATWGCIQNKEDLTDSECRGKWPASYRLGKKQRPKESFLDPNHT
HFVLVDNGTQHHFGVEIPFRARMENSIANMKTNTGKNASVYVPVVLLVLEGGPGTLETAH
QAVANNTPIVIVQGSGRAADILAFAYQNSIGEEIDASDQEGKTKKITQTIFDASVEAEIR
NQVEENFGKKNLVSHCEMVKETLKNRDLVTVFEFSIGGRGTAKDIDKAVLQALLRANKDQ
IFDQLKLALAWNRIDIAKSEIFTDDRFIQPNMLFEIMQSALILNRVRFVELLMDNGVNLK
DFLTKRRLLKLYNHRDFSNSSYQVQEINKNTQLYQLLDKIRRKNGNAKYISLVDVGCLIQ
ALIGDFYTPWYLLDPKIRDMDVEYLLDGVSAKGMGMPGIKKGILSMATGKKQESMDDGFL
TSDEYQVPDFDNPFQELFLWAVLLNRQEMAKILWKGGKDATAAALVASGMLNTLARETDD
TELAKKLKANSQEFSNLAIAVLNECYDVEEKKAQNLLIRELEHWGAATCVLLAVESNNKK
FISQTACQTLLNNVWMGHLSLDNQMLQLLLCVFVPPLIFPVIKFKEEAEHDVMSGKHQEQ
RAVLKEGRRKLEKQKTLNSIPVKEEKEESPVDYESKSSSLSFWKKLYYFYTAPVIIFAHN
VLSYVIFLGLYSYILLVKFSKDVTEEEIILIIWVFSIFAEEVRQLLSQYSIYERITIYRT
STNQNAPHGINPSASNHTQSFRGKNHSFHPPQKMMSSSTKTFNTKLHSYITDPWNIVDVV
TIIMFIVGITLRFLPYSSTLEAARCVMALNLVIFFFRILHIFSVHKQLGPKLVMIGRMLM
DLLYFIIILMVFVVSYSIAAHSIMFPNTDLSFLLVYNVMRMGYWNLYGELFLEDIEKEEP
DCTFDPLLYGNDTLPRCPTAVSHYAVPILMGFYVLFCNILLLNLLIAMFSNTYQIIQENT
DQYWCFQRYRLIYEYYTRPTLAPPLILISHLVLFVRWIIGKCSLCLSSQHSDLIKRFPLD
KARELVQWENMIADAYMNRLEHEEKEHIENRVINTQESIHELFFKLDELQDIQTSSGSSG
AAPVIKTPVNTVVKMPPQMDKRLLALEEQMQQSTVALNWIMKILQENEKNTAKVPPLMQD
RKENEKQKKEKDKALVKSTVDERKRLNYKTRIPRYPQSLVNRFPVPDDRVGWEIPFPEYD
PVVYEAPEVKSHPYWADTVDLIYMKPAERIGKIKFNDMIMXESVRSKSYGGAYEVRDGLP
LNPXGRTGLIGRGLLGRYGPNHCGDPIVTRWKRNDEGEIVMKEGKKVLEFVAIYRKDNEL
WSIPGGMCEPGQKVFQCLKAEFTEEALGSLVNDQNMKDRINRDLQYMLEHGEEIYKGICD
DPRNTDNAWLETLVFSYHDNTGKVLHPFLLRAGETVEAVTWLEVSSSLILHSSHLYYVKL
VAEKLNAYY
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggtgacaagggtcagtccggctgcccggacggacacaatatcctacgag
aacgcagggacccctagccacaacaagagcatgatcagtctccattacaacgaggaggca
gtggacgcagaggtggtgggggctgccccagtggagacaatgacttttgaacaaaggtgg
attcgggacaatatcaaaatgagagtgtgtaagaagtttgtagagaaatctatggaagtc
aacagtgatttgctgcctcccctccgaggcctggaaaggggttcatctcgtgtacagtca
gagaatgagacaatatgcaggtgtgggtacctgaagtctgcccaccccccctccctgtcc
tcgtcagggtcctcgggactggaggactggaaggtcgacacccacactaagtcaaccaga
accaatgcgtttggcactgttgaatttttgggttttggagagaatgaaagaaattatgtg
cgtgtggatgtgaacacaaagatggaggacatgatggagctgatgatggatgtctggggt
ttggaaaagcccaatctgctgatctctgtcacagggggtgccaaaaactttaccatgaaa
cagaaaatcaaggaggagtttcgccgcggtctgatgaaggtggctcgtagtacaggtgct
tggatcattaccggtgggaccaatgctggggttatgaagcatgttggggaggcagttcga
gactatgggctggtgtcggcctccacgaatcccatcatagtgataggtgtggccacctgg
ggctgtatacaaaataaggaggacctcactgattctgagtgtcgtggaaaatggccagca
tcataccggctcggaaagaaacagcgaccaaaagagagttttctggacccgaatcatact
cactttgttctggtggacaacggaactcagcaccattttggagtagagattccattcaga
gccaggatggagaactccattgccaacatgaaaaccaacactggcaaaaatgcatcagtt
tatgttcctgtggtactgttggtgttggagggaggaccaggaacattggagacggcccac
caagctgtcgctaataacacacctattgtcattgtccagggttctggaagagcagcggac
attttagcatttgcataccagaattcaattggagaagagatagatgcatcagatcaggag
ggcaaaacaaaaaagatcacacagacaatatttgatgcttcagttgaagcagaaataaga
aaccaggttgaggagaactttggaaagaaaaatcttgtcagtcattgtgagatggtgaaa
gagacactgaaaaaccgggacctggtaactgtatttgagttcagtattggaggtcggggc
acagctaaagatattgacaaagccgtcctacaggcattactcagggcaaacaaggatcag
atatttgaccagttgaagttagcactggcctggaacagaatagatattgccaaaagtgag
atctttacagatgatcgcttcattcaacccaacatgctgtttgagatcatgcagtctgcc
ttgattctgaatcgagttcgctttgtagagctgttgatggataatggcgtaaacctcaaa
gacttcctcaccaaacggagacttctcaagctctacaaccatagagacttttctaactca
tcatatcaagttcaagagataaacaaaaatacccaactgtaccagctgctggataaaatt
cgaagaaaaaatgggaatgcgaagtatatctccctggtggatgtggggtgcttgatccag
gccctgattggggatttctacacaccctggtacctgttggatcccaaaatccgggacatg
gatgtcgagtacttgctagatggggtatccgctaaaggcatggggatgcctggcatcaag
aaagggatactgtccatggcaacagggaagaagcaagaatccatggatgatggctttttg
acctcagatgagtaccaagtaccagactttgataaccctttccaagaactgtttctctgg
gcagttttactcaacaggcaggaaatggccaaaattttatggaagggaggaaaggatgcc
acagctgcagctcttgtggctagtgggatgttgaacaccctagctagagagacggatgac
acagaattagccaaaaaactcaaagccaactcacaagaattctcaaatcttgccatagca
gtgttgaatgagtgttacgatgtggaggagaagaaggctcaaaatctcctcattcgggag
ttggaacactggggagcagctacgtgtgtactgctggcggtggagtccaacaacaaaaag
tttatctcccagactgcctgccagactttgcttaacaacgtttggatggggcacctgtcc
ctcgataatcaaatgttacagttgttgctgtgtgtctttgtgcctccactgatatttcct
gtcatcaaatttaaagaggaagctgaacatgacgtaatgtctgggaaacaccaagaacag
agggcagttctaaaagagggaaggagaaaacttgaaaagcagaagactttgaactcaata
cctgtgaaagaagagaaagaagaaagtcctgtggattatgaatcaaaatcatctagtctc
agcttttggaagaagctgtattatttttacacagcacctgttattatatttgcacacaac
gtgttgtcgtacgtgattttcctgggattatacagctacattctcctggtgaagttctcg
aaagacgtcacagaagaagaaattatccttattatctgggtgttcagtatattcgctgag
gaggtccgacagttgttatcgcagtattcaatatatgagagaattacaatataccgcacg
tccacgaatcaaaatgccccacacggcatcaaccccagtgcttccaatcacactcagagt
tttcgaggcaaaaatcactcatttcatcccccacaaaagatgatgtcctcttcaacaaag
accttcaataccaaactacacagctacatcaccgatccctggaacatagtggacgtggtg
accatcattatgtttatcgtgggaatcaccttgcgcttccttccctactcgtccacgctg
gaggccgcccgctgtgttatggcccttaatctggtcatcttcttctttagaatcttgcat
atattctctgttcacaaacagctgggacccaaactagtcatgataggcaggatgttgatg
gacctgctgtacttcatcattatcctgatggtctttgttgtctcctactccatagcagct
cactctatcatgttcccaaacacagacctcagcttccttcttgtctataatgtcatgagg
atgggctattggaacctgtatggagaacttttcttggaggacattgagaaggaggagcca
gactgtacatttgacccccttttatatggtaatgatacgctgcctcggtgtcctactgct
gtcagtcattatgcagtgccaattctgatgggattttatgttctattttgtaacatacta
ctccttaaccttctcattgccatgttcagcaatacctatcagatcattcaggagaacact
gaccagtattggtgtttccaacgataccgcctgatttacgagtattacacccgccctacc
ctggccccgccccttattctgattagccatttggttttgttcgtacgttggattattggg
aaatgctcactgtgtttatccagtcaacacagcgatctcataaaacggttccccttagac
aaggctagagaactcgtccagtgggaaaatatgattgcagatgcatacatgaaccgctta
gaacatgaggagaaggaacatatagaaaatcgagttattaacacccaggagtcgatacat
gagctatttttcaagctggatgagttacaggatatccagacctcatctggatcatccgga
gcagcccctgtcatcaaaactcccgtgaacacagtggtcaagatgccaccccagatggac
aagagactgttggctctggaggaacagatgcagcagagtactgtggcactcaactggata
atgaaaattttacaagaaaatgaaaagaatactgcaaaagtcccacctttgatgcaagat
agaaaagaaaatgagaaacagaaaaaagaaaaagacaaagcattggtgaaatccacagta
gacgaaagaaaacgtctgaactacaagacaaggattccccggtacccacaaagcctggtc
aacaggttccctgtcccagatgacagggtcggatgggagataccatttcctgaatatgac
ccagtagtctatgaagcaccagaagttaagagtcatccatattgggctgacactgtagac
ctcatctacatgaaaccggcggagagaattggaaagatcaagtttaatgatatgattatg
nnagaatctgtgcgatcgaaaagttatgggggtgcttacgaggtacgtgatggactacct
ctgaacccgncaggtcgtacaggattaataggtcggggactcttaggcagatatggacct
aaccactgtggagacccaattgtgaccagatggaagaggaatgatgaaggagaaattgta
atgaaggaaggaaagaaagtattagaatttgtggccatttacagaaaagacaatgaactg
tggtcaattccagggggtatgtgtgagccaggacagaaggtgttccagtgtttgaaggcc
gagtttacagaggaagctctaggatctttagtcaacgaccagaacatgaaagaccgaatc
aaccgagacctacagtacatgctggagcatggcgaagagatatacaaaggaatttgtgac
gaccccaggaacacagacaatgcctggctggagactcttgtgttcagttaccatgacaac
acaggcaaagttcttcatccattcctattacgagcgggcgagaccgtggaagcagtcacc
tggttagaagtctcatctagtctcattctacattcctcccacttgtactatgtgaaactt
gtagcggagaaactcaacgcctactactga
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