Ostrea edulis (European flat oyster): 125683544
Help
Entry
125683544 CDS
T09123
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X2
KO
K14314
nuclear pore complex protein Nup210
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125683544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125683544
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125683544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_5th
Ig_NUP210_6th
Ig_NUP210_9th
Ig_NUP210_3rd
Ig_NUP210_14th
NUP210_Ig
Ig_NUP210_8th
Ig_NUP210_16th
Big_2
Ig_Eae
Motif
Other DBs
NCBI-GeneID:
125683544
NCBI-ProteinID:
XP_048780768
LinkDB
All DBs
Position
6:8749458..8827442
Genome browser
AA seq
1926 aa
AA seq
DB search
MAAKLNQRFLFSLFIALIVVFIYTNAARLSDPKILLPYHSSAITNFTLKINLSREEARLP
DSCYTWQSTHQEVASIQLVNSSDGECAFSAVISAVSKSPYRKTSMVLAENKVTGEILRCI
VIVEAISRFEIETTTRLLYLEDSPEELTIKGYDEEGNVFSSLAGLEFEWSLLPDTSTQGE
EMVDILRITKFTESHYVMPYYIQQLEAKGLQGDLILVEGMRTGSAHVKARIRDGSYKDVK
SPVVKLIVVANLIINPAEAYILKHATIKYSVQLIKQSSMLEISLPSSQFFLEVQEDSICA
LDAKTSIATGQEIGSTDIVLTDRNLKQDALVKPSAVLYVVAPSYLGFVVLPNKKWVLETE
IEYTIVIEVFDKNSHKIYPSDNVMLKAMFPKEYFDVRFSTRNGTYHHVYTLKPGKTSIEG
VLASIVQEDGTEIEVSPAVKGSRSVEIFDPIRVRPEKLYFPWDPHSPTSHQYKLQVKGGS
GEYVWSSSNVETTTVNVKGEITTGKRGEAQITAADAKNRVHTGSTKVYVLPPEDMKFVPQ
HVEAVVGTELEMPLAVFGQYQGKLYPFNDCRKMKVNISFSDPTAFQLNRVSLSIPEEGCC
SLRLKSVQRGHTVVVASYTSRGIDLSATVTIAAYDPLMPVDPEKEAVVAVGSRKELIFKG
GPQPWIIDSLKYFQDLTSTNSAITKVQKVKILGNNRGFHNFYVTCIDFGEQELTLRVGNN
KTTTNQFPAVAEASIRLSCSEPVGLQLHPDLKYPENLPPCPITKEQAIAIPIHCQRDLDI
VVTVTDSLGRKFDNFSSLDFHWSVSDQSLATLDDSIDSSIQISTMSSKEGFNYIKYYRVL
LTRGRPGFVVITASISSYLERHLKMAASPISTRIYPKISRSLELKLVEEAVVKPDIISLF
NHPSNAYTVDVQRGSGFFHVIPDQAGVVKLDYTDKTKQMQVVPVTDGSMKVTVYDLCVYN
RDPPTATIFVSGVGSVELSVTEKVEVDKEAKVKVRVMDAHGKPLQASFFRLMGLRLIPTS
NIITIRKDKDQRDELTTEYYIMHGAQVGHTSLVAEARPSHGVVIRSLARPVEVFPPLQLI
PRNITLIIGAKFQVLSRGGPTPQCTVLFSIGDSNIADVSSSGLLDAQNLGTTTVLGQAVG
QDPETGETIIYSQDQVTVNVVELAGVRIHSALSRMQTGTKMPLYGIGLTEHETPFTFGSA
TPPLVFTWSINNKDVIQLQNVFHQCGLKHSTESDFARQLVAMSAGQVTVKLTVRPHLTSR
SQVKGHGTLTDELQVEVFEKLTVISPKVCDGRILLTPNTEAVIKTNRDGSAKMSYHVISL
DDPSPVTVGEGGLLTIGSLTGQVALHVTSQEEFGTNQTLVLLVKVKPVSYLMINSGLSLS
TAEGYIKSIPVGTTLTLTVTYHDNVGEQFYATNVQMRYRLNRYDLVHIKHGSENDTLIVR
AAEVGQSILKVWDHRNPWLADYINISVDYVITPSKVTVTLGTVVCFKSPLNSVRGYAGHW
QSRSKVIDIDGDSGVSTSAAVGHSLVENTLSQDVTTYTEVTVQPIDQLTVDDSWSFLTNV
KNRLTEYFITVSLNSDSEVIGENCTGEIQAKNFMPTFVPITCELVFNTAVNGLSVSDLFQ
VSATFSSKKGKYGCLVKKLHPETLVQQISTMSVDLQLSVLVPNMENQLLVMAPVKKYQYL
PPFYVHNSEVLLSTAAPLSSIRVSTIPDLSSCIQAAVSDEIILEVMTPEKDSQSGTILIF
PVRLVESASLWDRESVESHVELSCRKTGQKVRLPVSVRLIGQRPEHFGYRGRPVGWGAFF
VNSINNNQSLFSYLFLIIATAVAVLVAYHYVIGPRYKAVANTNPAFLRPGAAGAASPPSP
MYPQLQFSPNYSPPPYTSYASPLTSPKSPALWSTEYHPQDGSSPRRRSPYRPSGATPPFS
SRQSPL
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaagttaaaccaaagatttcttttcagtttgtttattgcattaattgtagta
tttatttatacaaatgctgccagattaagtgatcctaagatcctcttaccttatcatagt
tctgccatcactaattttacgcttaaaataaatttatcccgagaagaagctaggcttcca
gatagttgttacacatggcagtccacacaccaagaggttgcttccatccagcttgtcaac
agcagtgatggagagtgtgcattttctgcagtcatctctgcagtgtcaaagtctccgtac
aggaaaacctcgatggttcttgctgagaataaagtgactggagaaattcttcgctgtatt
gtgattgtggaggcaatatcacgatttgagatcgagaccaccacccgtttgttgtatctg
gaagactcaccagaggaacttaccatcaaaggatatgatgaagaaggcaatgtgttttcc
agtttggctgggctggagtttgagtggagcctactgcccgacacaagtacccagggggag
gaaatggtggacattctcagaatcacaaagtttacggagtctcattatgtcatgccctat
tacatccagcagctggaagccaaaggacttcaaggggacctaattcttgtggaaggaatg
cgaacaggaagtgctcatgttaaagctcgcataagagacggctcctacaaggatgtgaaa
tcccctgttgtcaaattgattgtggtagccaacttaatcatcaaccccgcagaggcctac
attctgaagcatgccaccattaagtactcggtgcagctcatcaagcagagctccatgctg
gagatctccctgccctcctctcagttttttctggaagttcaggaggacagcatttgtgca
ttagatgccaagacctccattgctacaggacaagagataggctccactgatattgtactc
acagacagaaatttgaagcaggatgcccttgtgaagcccagtgctgtgttgtatgtggtg
gccccaagctacctgggctttgtggtcctgccaaacaagaagtgggtgttggagacagag
atagagtacactattgttatagaggtgttcgacaaaaacagccacaagatctacccatct
gataatgttatgctgaaggcaatgtttcctaaagaatactttgatgtgaggttttccact
agaaatggaacctatcatcatgtttatacgctgaagccggggaagaccagcattgaaggt
gttctagcatccatcgtacaggaagatggtacagaaatcgaggtcagccctgcagtgaaa
gggtcacggtccgtggagatttttgatccgattcgtgtcagaccagagaaactttacttt
ccttgggatccacactcgcccacaagtcaccagtataaattacaggtgaaaggagggagc
ggagagtatgtgtggagctcgtccaatgtggaaaccaccacagtcaatgtcaaaggggag
atcaccacagggaagcggggagaggcccagatcacagccgccgacgccaaaaacagggtg
cacaccgggtcaacaaaggtttatgttttgcctccagaagacatgaagtttgttcctcaa
catgtggaggcagtggtcgggacagaactggagatgcccctcgctgtttttggacaatac
caaggcaaactatatcctttcaatgattgtcgaaagatgaaggtcaacatttctttctct
gatccgacggccttccagctgaacagagtttctttatctattcccgaggagggttgttgc
tcactaagactgaaatcagtgcaaagaggtcacactgtggtggttgccagctacacatcc
agagggatcgatttgtctgccaccgtaaccatagcagcttatgatccgctgatgcctgtt
gacccagaaaaggaagcagtcgtcgctgtggggtccaggaaggaactgatatttaagggt
ggccctcagccctggatcatcgattcgctcaaatacttccaggacttaaccagtacaaat
tctgctatcacgaaggtccagaaggtgaaaattcttggaaataatcgtggtttccataac
ttctatgtaacgtgtattgactttggggagcaagagttgactctgcgtgtgggcaacaat
aagacgacaaccaatcagtttccagctgtcgcagaggcttccatcagattgagttgttca
gaaccagtgggtttacagctgcacccagatctgaagtatcccgagaacctccctccgtgt
cctatcacaaaggagcaagccatcgcgattcccatccactgtcagagagacctggacatc
gtcgtcacggtcacagactccctgggtaggaagtttgacaatttttcctcactggatttc
cattggtcagtttcggaccaatcactggccacactagatgattctatagacagctctata
cagatctccaccatgtctagcaaagagggattcaattacatcaagtattaccgagtcctt
cttacccgaggtcgacctggttttgttgttattacagcctccatcagctcctatctggag
agacacctcaagatggctgcatctccaatatcgacaagaatttatcccaagattagtcga
tcgctggagctgaaacttgtggaggaagctgttgtcaaaccagacattatctctctgttt
aatcacccgtctaatgcgtacacagtggacgtccagagaggctcgggattcttccacgtg
atccctgaccaggcgggcgtggtgaaactggactacacggataaaactaagcaaatgcag
gttgtcccagtgactgacggttctatgaaggtcaccgtttatgacctctgtgtgtacaat
cgagacccgccaacagccaccatatttgtgtcaggggtaggaagtgtggaactctcagtc
actgaaaaggtcgaagttgataaagaggctaaggtcaaggtcagagtaatggatgcccat
ggtaaacctctgcaagccagcttcttcagactgatggggctaaggctgatccccacctct
aatatcatcaccatcaggaaagataaggatcagcgggatgaacttaccacagaatattac
atcatgcatggagcacaagttggtcacacttcactggtcgctgaagctcgtcccagtcat
ggggtggtgatcaggagcctggcgaggccagtggaggttttccctcctcttcagttaatt
cctaggaatatcacattgataattggagcaaagtttcaggtgctgagtagaggaggcccc
acccctcagtgtacggtcctgttctccatcggagatagcaacattgcagatgtgtccagc
agtgggttgttggacgcccagaacctggggaccaccacagtgttaggtcaagccgtgggt
caggacccagagacgggggaaaccatcatatactctcaggatcaggtgacagtgaatgtt
gtcgagctcgcgggggtcaggatccactcagctctttcccggatgcagaccggcaccaag
atgcccctatatggcattggcctgacagagcacgagacccccttcacctttggaagtgcc
acgccccctctggtgttcacctggtccatcaacaataaggatgtcatacagctacagaat
gtcttccatcagtgtggtctgaaacactcgacagagagtgactttgcgcggcagctcgta
gctatgtcagctggacaagtgacagtcaaactcactgttagaccccatctaacttccagg
tcgcaggtcaaaggtcatgggacactgaccgatgaattgcaagtggaggtttttgaaaaa
ttaacagtcataagcccgaaggtgtgtgacggaagaattttgttgacacccaatactgaa
gctgtcatcaaaaccaacagggatggctctgctaagatgagttaccatgttatctccctt
gatgacccaagtcctgtgacagtgggggaggggggcctactaaccatcgggtcactgact
ggacaggtggcgctacatgtcacttcgcaggaagagtttggcaccaatcagactttggtt
ctacttgtcaaggtgaagcctgtctcgtatttgatgataaactcgggcctgtcattgagt
actgctgaaggttacatcaagagcatcccagtggggacgacactgaccctgactgtgact
taccacgacaatgtcggagaacagttctacgccaccaatgtccaaatgagataccgctta
aacagatatgaccttgttcacattaagcatggatctgagaatgacacgctgattgttagg
gctgctgaagtgggacagagcattctgaaggtgtgggaccatagaaacccttggttagca
gactacatcaacatctccgtggattacgtcattactccttcaaaagtcactgtcaccctg
ggcactgtcgtctgcttcaaatctccgcttaattctgtgagaggttatgctggccactgg
cagagtagaagtaaggtgatagatattgacggggactcgggagtttccacgtctgcagct
gtaggtcacagtctggtggagaacacactctcacaggatgtcaccacctacacagaggtg
actgtgcaacccattgatcagctgactgtagacgactcctggtccttcctcaccaatgtt
aaaaatcgcctgacagagtactttatcacagtgtccttgaactctgattcggaggtcata
ggagaaaattgcactggtgaaatccaggccaagaacttcatgccaacttttgttcccatc
acttgtgagctggtgttcaatactgcagtgaatggactgtctgtctccgacctttttcaa
gtgtcagccacattcagttccaagaaaggaaaatatggctgtctggtgaagaagctacat
cccgagaccttagtacagcagataagcaccatgtctgtcgacctgcagttgtctgtgctg
gttcccaacatggagaatcaacttcttgtgatggcaccagtcaaaaagtaccagtatctg
ccgccattttatgttcataactcagaggtgttattatctacggcagctccactgtcttcc
atccgagtgtccaccattccagatctgtcctcatgtatacaggctgcagtgagtgatgaa
atcattttagaggtcatgaccccagaaaaagacagccaatcaggaaccattttgattttc
cccgtaagacttgtagagtctgcttcattgtgggatagagaaagtgttgaaagtcatgtg
gaactgtcctgtagaaaaacaggtcaaaaggtcagactgcctgtgtcggtcagactgatt
ggacagcgaccggaacattttggataccggggacgaccagtcgggtggggtgccttcttt
gtgaacagcatcaacaataaccagtcactattctcctacctcttcctgatcatcgctacg
gctgtagctgtgcttgtggcttaccattacgtgattggacctcgttacaaggcagtggcc
aacactaatccagcgttcctcaggcccggggctgcaggagctgcctctcccccctccccc
atgtatccacagctccagttctcacctaactactccccacccccttacactagttatgca
tccccgttgacgagtcctaaatcacctgcattgtggtcgactgagtatcacccccaggat
ggaagcagccccaggcggcgatccccttacagacccagtggtgctacaccccccttcagc
tccagacagagtccgttataa
DBGET
integrated database retrieval system
