Ostrea edulis (European flat oyster): 125683598
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Entry
125683598 CDS
T09123
Name
(RefSeq) uncharacterized protein LOC125683598
KO
K08537
farnesoid X receptor
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125683598
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oed03310
]
125683598
Transcription factors [BR:
oed03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125683598
Nuclear receptors [BR:
oed03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125683598
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
125683598
NCBI-ProteinID:
XP_048780877
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Position
6:complement(56905219..56923092)
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AA seq
718 aa
AA seq
DB search
MWGWPDMVIELFPECNFESDADLIDREVRIMEDESIYDDFEDIFLTKDDRSIFNDPLCSG
QGKEVSVNILEISEPSQSGMLELPVVGVGMEVSVTTLEISEPSKSGMLELPVVGVGMEES
VNTLEISEPSKSGMLELEIDLKEFGIDEPPSNDVGSRGMSSERQVNLLSGSDFSNNIGSL
VENLNLSGSLDLQLGSVGVHRVVERQERCNEETSMDGLDLPDWLDPEPVKVDETQRNPKF
KAPNPKMMELVEYILDMEGIKDICAASAMTDIIVEEIVDNSIAASDASGSSGANSPSSGE
RLHCSDTPCGQDANYSREHRSIKSVVSKAKDPGPKSTYLPPCRVCGDNASGFHYGANTCE
ACKGFFRRSIVKIQQKKESYKCFGKGDGCVLGPGKRNPCAACRYARCLEAGMSISAIKTG
RYTYEKRTKDTVEVRKMQTAEKPLCQETYISDSEVDQIIQSLKDILLKNCPDAYTIFDRE
TNLTRQLKIYNDHKAKLEIFGTMSVIPKEVWDEFYKETGIDLDNRQELMREMACRMEYGL
SVMVDFVRAIPGFANLSVSDQTELIKASHFEFFFLMHHKSFNPELRVVSGLIDMHQSEME
KLAEKEMVDQIFQFSTSLKNLELSLDEIILLRGISVTFTDRCQLEDPKAVERIQWKLVNA
LRVLAKRQNFKPEQRLWHILDRLTALRTMTEISKELDKQKCSWPVMKEHPLVLDILQN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggtggccagacatggtaattgaactatttcccgagtgcaactttgaatcggat
gctgaccttatagacagggaggtgaggattatggaggatgaatctatttatgatgatttt
gaggatatttttctaaccaaggatgacagatccatcttcaatgaccctctctgtagtggg
caagggaaggaggtgagtgtgaacatattggagatcagtgaaccgtcccaaagcgggatg
ctagaactccctgttgtgggggtagggatggaagtgagtgtgaccacattggagatcagt
gaaccgtccaagagcgggatgctagaactccctgttgtgggggtagggatggaagagagt
gtgaacacattggagatcagtgaaccgtccaagagcgggatgctagaactggagatagat
ttgaaggagttcgggatcgatgaaccacctagtaacgatgtcggctccagagggatgagt
tcggaacgtcaagttaacctcctctctggttctgactttagtaataatattggaagtttg
gtggagaacctgaacttgagtggaagtttggatttgcagctgggaagtgttggagtacac
agagtcgttgaaagacaggaaagatgtaatgaagagaccagcatggacggattggaccta
cccgactggcttgatccagaaccagtcaaggtcgatgaaactcaaagaaacccaaaattc
aaagccccgaatccaaaaatgatggagcttgtagaatacatcctggacatggaaggtatt
aaggatatttgtgcggcttcagcaatgacagatataatcgtggaagaaatcgtagacaat
tctatagcggccagtgacgcgtcaggctcgtccggtgctaatagtccctccagtggtgag
cgtttgcactgctctgataccccctgtggacaagatgcaaactactcgcgggaacacaga
tctattaaaagcgttgtgtccaaggcaaaagaccctggacccaaatctacttacctccct
ccctgtcgtgtatgtggagacaacgcgtccggatttcactacggggctaacacctgtgaa
gcatgcaagggtttcttcaggagaagcattgtgaagattcagcaaaagaaggaatcgtat
aaatgtttcggaaagggagacgggtgtgttttaggaccgggaaagagaaatccatgtgca
gcatgtagatatgcaagatgtctagaggcgggaatgtcaataagtgcgattaaaactggt
cggtatacctatgagaagagaacgaaagacacggtagaagtaagaaaaatgcagactgca
gagaaaccactgtgccaggaaacgtacattagtgattccgaggtagaccagatcatccag
tcattgaaggatattctgctgaagaattgtccggatgcgtacacaatctttgacagagaa
accaatctcactagacagttgaagatctataatgaccacaaagccaaattagaaatattt
ggtaccatgtcggtgataccaaaagaagtttgggatgagttttataaggaaacaggaatc
gacttggataacagacaagaactgatgagagaaatggcgtgcaggatggaatacggacta
agtgtgatggtcgattttgttcgagctattccgggatttgcaaatctctccgtctctgac
cagacggaactaattaaagcttcgcatttcgaatttttcttcttgatgcatcataaatca
tttaaccctgaattacgggtagtatcaggattgatagatatgcaccaaagtgagatggag
aaacttgcagaaaaagagatggtggaccaaatttttcaattcagtacttcacttaaaaac
ctcgagctgtctctcgatgagattattcttctgcgagggataagcgtcacattcacagac
cgatgtcagttagaagacccaaaagccgttgaacgaattcagtggaagctggtcaacgca
ctaagagtgttagcaaaacgtcagaacttcaaaccagagcaaagattatggcatattctg
gaccgcctgactgctctccggactatgacagaaatcagcaaggaactggacaaacagaag
tgttcgtggcccgtgatgaaggaacaccctttggttttggatatcctacagaactga
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