KEGG   Ostrea edulis (European flat oyster): 130046417
Entry
130046417         CDS       T09123                                 
Name
(RefSeq) actin, cytoplasmic-like
  KO
K05692  actin beta/gamma 1
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03082  ATP-dependent chromatin remodeling
oed04145  Phagosome
oed04814  Motor proteins
oed04820  Cytoskeleton in muscle cells
oed05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130046417
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130046417
  09142 Cell motility
   04814 Motor proteins
    130046417
   04820 Cytoskeleton in muscle cells
    130046417
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    130046417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oed03021]
    130046417
   03019 Messenger RNA biogenesis [BR:oed03019]
    130046417
   03036 Chromosome and associated proteins [BR:oed03036]
    130046417
   03029 Mitochondrial biogenesis [BR:oed03029]
    130046417
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oed04812]
    130046417
   04147 Exosome [BR:oed04147]
    130046417
Transcription machinery [BR:oed03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130046417
Messenger RNA biogenesis [BR:oed03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     130046417
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     130046417
    NuA4 complex
     130046417
  Chromatin remodeling factors
   BAF complex
    130046417
   PBAF complex
    130046417
   GBAF(ncBAF) complex
    130046417
   SWR1 complex
    130046417
Mitochondrial biogenesis [BR:oed03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    130046417
Cytoskeleton proteins [BR:oed04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     130046417
Exosome [BR:oed04147]
 Exosomal proteins
  Proteins found in most exosomes
   130046417
SSDB
Motif
Pfam: Actin GerD
Other DBs
NCBI-GeneID: 130046417
NCBI-ProteinID: XP_056009938
LinkDB
Position
2:39436378..39441056
AA seq 376 aa
MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIIGRPRHQGVMIGMGQKDSYIGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVSIQAVLSLYGAGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFVNTAEREIVRDIKEKLCYVALDFEQEMATSASSSSIEKS
YELPDGQVITIGNERFRCPEALFQPAFLGMESSGIHESTYNSIMKCDVDIRKDLYSNTVL
SGGSTMYPGIADRMQKEITALAPSTMKIKVIAPPERKYSVWMGGSILASLSTFQQMWITK
QEYDESGPCIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggctgatgacgatattgctgcgttagttattgacaatgggtccggaatgtgcaaggcc
ggattcgccggagacgatgcccccagggccgtgtttccctctattattggacgtccaaga
catcaaggtgtcatgattggcatgggtcagaaggacagctatataggagacgaggcccag
agcaagagaggaatcctcaccctcaagtaccccattgaacacggtatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaatgaactccgtgtggcccctgag
gaacatcccgtcctcctgaccgaggccccactcaatcccaaagccaacagagaaaagatg
acacagatcatgttcgaaactttcaactctcccgccatgtatgtttctattcaggccgta
ctttcactatatggtgctggtcgtacaactggcatagtgctcgactctggagacggagta
tctcacacagttcccatctacgaaggttacgcacttccccacgccatcctgagactagat
ctcgctggacgtgatctgaccgattatctcatgaagattctcacagaacgtggttactct
ttcgtaaatacagcggaaagagaaattgtcagagacatcaaagagaagttgtgctatgtt
gctttggacttcgaacaagaaatggcaacttctgcgtcctcatcgtccatagaaaagagc
tacgaacttccagacggtcaggtcatcaccattggtaacgagcgttttaggtgtccagag
gcgttgtttcaacctgcttttcttggaatggaatcttctggtatccatgaaagtacatat
aacagtatcatgaagtgtgatgtcgatatccgcaaagatttgtactcgaacacggtatta
tctggtggttcaaccatgtaccctggtattgctgatcgtatgcaaaaagaaatcacagct
ttagctcctagtacaatgaagattaaggtcattgccccaccagaaaggaaatactccgtc
tggatgggtggttccatccttgcttctctgtccaccttccagcagatgtggatcactaaa
caggaatacgacgaatcaggtccgtgtattgtccacaggaagtgcttttaa

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