Ostrea edulis (European flat oyster): 130046417
Help
Entry
130046417 CDS
T09123
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
oed04145
Phagosome
oed04814
Motor proteins
oed04820
Cytoskeleton in muscle cells
oed05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130046417
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130046417
09142 Cell motility
04814 Motor proteins
130046417
04820 Cytoskeleton in muscle cells
130046417
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130046417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
130046417
03019 Messenger RNA biogenesis [BR:
oed03019
]
130046417
03036 Chromosome and associated proteins [BR:
oed03036
]
130046417
03029 Mitochondrial biogenesis [BR:
oed03029
]
130046417
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oed04812
]
130046417
04147 Exosome [BR:
oed04147
]
130046417
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130046417
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
130046417
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
130046417
NuA4 complex
130046417
Chromatin remodeling factors
BAF complex
130046417
PBAF complex
130046417
GBAF(ncBAF) complex
130046417
SWR1 complex
130046417
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
130046417
Cytoskeleton proteins [BR:
oed04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
130046417
Exosome [BR:
oed04147
]
Exosomal proteins
Proteins found in most exosomes
130046417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
GerD
Motif
Other DBs
NCBI-GeneID:
130046417
NCBI-ProteinID:
XP_056009938
LinkDB
All DBs
Position
2:39436378..39441056
Genome browser
AA seq
376 aa
AA seq
DB search
MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIIGRPRHQGVMIGMGQKDSYIGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVSIQAVLSLYGAGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFVNTAEREIVRDIKEKLCYVALDFEQEMATSASSSSIEKS
YELPDGQVITIGNERFRCPEALFQPAFLGMESSGIHESTYNSIMKCDVDIRKDLYSNTVL
SGGSTMYPGIADRMQKEITALAPSTMKIKVIAPPERKYSVWMGGSILASLSTFQQMWITK
QEYDESGPCIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacgatattgctgcgttagttattgacaatgggtccggaatgtgcaaggcc
ggattcgccggagacgatgcccccagggccgtgtttccctctattattggacgtccaaga
catcaaggtgtcatgattggcatgggtcagaaggacagctatataggagacgaggcccag
agcaagagaggaatcctcaccctcaagtaccccattgaacacggtatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaatgaactccgtgtggcccctgag
gaacatcccgtcctcctgaccgaggccccactcaatcccaaagccaacagagaaaagatg
acacagatcatgttcgaaactttcaactctcccgccatgtatgtttctattcaggccgta
ctttcactatatggtgctggtcgtacaactggcatagtgctcgactctggagacggagta
tctcacacagttcccatctacgaaggttacgcacttccccacgccatcctgagactagat
ctcgctggacgtgatctgaccgattatctcatgaagattctcacagaacgtggttactct
ttcgtaaatacagcggaaagagaaattgtcagagacatcaaagagaagttgtgctatgtt
gctttggacttcgaacaagaaatggcaacttctgcgtcctcatcgtccatagaaaagagc
tacgaacttccagacggtcaggtcatcaccattggtaacgagcgttttaggtgtccagag
gcgttgtttcaacctgcttttcttggaatggaatcttctggtatccatgaaagtacatat
aacagtatcatgaagtgtgatgtcgatatccgcaaagatttgtactcgaacacggtatta
tctggtggttcaaccatgtaccctggtattgctgatcgtatgcaaaaagaaatcacagct
ttagctcctagtacaatgaagattaaggtcattgccccaccagaaaggaaatactccgtc
tggatgggtggttccatccttgcttctctgtccaccttccagcagatgtggatcactaaa
caggaatacgacgaatcaggtccgtgtattgtccacaggaagtgcttttaa
DBGET
integrated database retrieval system