Oerskovia sp. KBS0722: FFI11_006750
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Entry
FFI11_006750 CDS
T06124
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
oek
Oerskovia sp. KBS0722
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oek03009
]
FFI11_006750 (rlmC)
Enzymes [BR:
oek01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
FFI11_006750 (rlmC)
Ribosome biogenesis [BR:
oek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FFI11_006750 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_12
TehB
Methyltransf_23
Bdbt-like_TPR
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QDW62271
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All DBs
Position
1496650..1497789
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AA seq
379 aa
AA seq
DB search
MQCPHFDAHECRSCTLMGQGYAAQLADKQRHAGDLLAAHADLRWERPVASRESGFRNKAK
MVVGGTVERPTLGILDAGGRGVDLQDCGLYPADLQAVFPVLADFVTRASLTPYDVSTRRG
ELKNVLVTQSPDGELMVRFVLRSQEPVSRLRKHLPSLLDALPQARVVSANILPEHKAALE
GEQEILLTEADTLTMRVNGIEMHLRQQSFFQTNTEVAAALYRQGREWVDEAAPDSVWDLY
CGVGGFALHCATPGREVVGIESSREAIVSAERSAAQAGLDDVTFEAGDATAFALAAQHVP
DLVIVNPPRRGIGAELAGWLESSTVQQVVYSSCNAVSLARDLAAMPSLRPVRGRVLDMFP
QTTHYEVMVLLERTDQVPA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcccccacttcgacgcccacgagtgccgttcgtgcaccctcatgggccagggc
tacgccgcgcagctcgccgacaagcagcggcacgcgggcgatctcctcgcggcgcacgcc
gacctgcggtgggagcgaccggtcgcgagccgcgagtcgggcttccgcaacaaggccaag
atggtcgtgggcggcacggtcgagcgcccgacgctcggcatcctcgacgcgggcggacgc
ggcgtcgacctccaggactgcggcctctacccggccgacctccaggccgtcttccccgtc
cttgcggacttcgtcactcgggcgagcctcacgccctacgacgtgtcgacgcggcgcggc
gagctcaagaacgtgctggtcacccagtccccggacggcgagctcatggtgcgcttcgtg
ctgcgctcgcaggagccggtctcgcgcctgcgcaagcacctgccgagcctcctcgacgcg
ttgccgcaggcgcgcgtggtgtcggccaacatcctgcccgagcacaaggccgcgctcgag
ggcgagcaggagatcctgctgaccgaggcggacacgctgaccatgcgcgtcaacgggatc
gagatgcacctgcgtcagcagagcttcttccagaccaacaccgaggtcgccgcggccctg
taccgccaggggcgcgagtgggtcgacgaggccgcgccggacagcgtctgggacctgtac
tgcggtgtgggcggcttcgcgctccactgcgcgactcctggcagggaggtggtcgggatc
gagtcgagccgcgaggcgatcgtgagcgccgagcgcagcgccgcccaggccgggctcgac
gacgtgacgttcgaggccggcgacgcgacggcgttcgccctcgcggcccagcacgtcccc
gacctcgtgatcgtcaacccgccgcggcgcgggatcggcgccgagctcgcggggtggctc
gagtcctcgaccgttcagcaggtcgtctactcgagctgcaacgcggtgtcgctggcccgc
gacctcgctgccatgccgtcgctgcgccccgtgcggggccgcgtcctggacatgttcccg
cagaccacgcactacgaggtcatggttctgctcgagcgcacggatcaggtcccggcctga
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