Osmerus eperlanus (European smelt): 134006853
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Entry
134006853 CDS
T10927
Symbol
ext1b
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oep01100
Metabolic pathways
Module
oep_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
Enzymes [BR:
oep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
134006853 (ext1b)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
134006853 (ext1b)
Glycosyltransferases [BR:
oep01003
]
Glycan extension
O-Glycan
134006853 (ext1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
134006853
NCBI-ProteinID:
XP_062301915
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Position
20:8414408..8474139
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AA seq
740 aa
AA seq
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MQAKKRYLILLSAGACLVLLFYFGGVQLPATGRNRHDRSRNGYRTDQPWPHFSDPLQRFL
PWDQLDTEEYNLHISPRQKRDVNTSVYKGKRCRMDSCFDFSICKKNGFKVYVYPQQKGEK
ISESYQNILSIIEGSRFYTSDPGQACLFILSLDTLDRDQLSPQYVHNLKTKVQSLALWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHPQTGG
ERGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNAEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYREMLYNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIISWNTAAVIGDERLLLQIPSTVRSIHQDQILSLRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLESSSRSTLMWNRHPGGLFALPQYSPHLGDFPFYYATLGIKPYAKFTAVIHA
VTPLVSQSQPILKLLLAVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKIM
SSRFLPYETIVTDAVFSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPDSLKGMVDQLANCEDILINFLVSAVTK
LPPIKVTQKKQYKETMMGQTSRASRWADPDHFAQRQTCMNKFASWFGGMPLVHSQMRLDP
LLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttaatcctgctctccgccggtgcatgtctagttctactg
ttctactttggtggggtccaacttccagccacgggcaggaaccggcatgaccgaagccgc
aatggatatcgcacggaccagccgtggccacacttctccgacccgttacaacgtttcttg
ccctgggatcaactggacacagaggaatacaaccttcacatatctcccaggcagaagagg
gacgttaacacgagtgtttacaaaggcaaacgatgccgcatggattcgtgctttgatttc
tctatatgtaaaaagaacggtttcaaagtttatgtctacccccagcaaaagggggagaaa
atctcagaaagttaccagaatattttatcgatcattgagggatccaggttctatacatct
gacccgggacaagcttgtctattcatcctgagcttggacactttagatagggaccagctc
tcgccacagtacgtgcacaatctcaaaaccaaggtccagagcctggctctctggaacaac
ggtagaaaccacctcatatttaacctgtactcggggacatggccggactacacggaagac
cttggcttcgacataggacaggctatgttggccaaggccagcataagtacagagaacttt
cgacccaacttcgacgtgtccatcccgctgttttccaaggagcacccgcaaaccggcggt
gagaggggatacctgaagtacaactccattccacctttcaggaaatatatgctggtgttc
aaagggaaacggtacctgacaggtattgggtcagacacgaggaatgccttataccatgtc
cacaacgcggaggacgtggtgctcctcacgacctgcaaacacggcaaggactggcagaag
cacaaggacgcgcgctgtgacaaagacaacgcggaatatgacaagtacgactacagggag
atgctgtacaactccaccttctgcctggtgcctcggggaagacgcctggggtccttccgc
ttcctggaggctctgcaagcggcgtgtgttccggtcatgctcagcaacggctgggagctg
cccttctctgagatcatcagctggaacaccgcggcggtcatcggggacgagagactactg
ctgcagatcccgtccacggtgcgctccatccatcaagaccagatcctgtctctcagacag
cagacccagttcctctgggaggcctacttctcctctgtggagaaaatagtgctgaccact
ctggagatcatccaggaccgtgttctggagtcctcatccagaagtaccctgatgtggaac
cggcatcctggggggctcttcgctttaccacagtactccccccacctgggggacttcccc
ttctactacgccaccctaggaattaaaccatacgcgaagttcacagccgtcatccacgct
gtcacccccctggtctcccagtcccagcctattctcaagctgctgctggctgtcgccaag
tcacagtactgcgctcagatcatcgtgctgtggaactgtgacaagcccctccctgccaag
caccggtggcccgctacctcagtacctgtcatcgtcatcgagggagaaaacaagatcatg
agcagccggttcctgccctatgagaccatagtgacggacgccgtgttcagtctggacgag
gacacggtcctctctaccacagaggtcgacttcgcctttacggtgtggcagagtttccca
gagaggattgtgggatatcctgcccgtagccatttctgggacagcaacaaggaacgctgg
gggtacacgtccaagtggaccaacgactactccatggtgctcactggggcggccatctac
cataggtattaccacttcctgtacaccaatttcctgccggacagcctgaagggcatggtg
gaccagctggccaactgcgaggacatcctcatcaacttcttggtctctgcggtaaccaag
ctccctcccatcaaggtcacccagaagaagcagtacaaggagaccatgatgggacagacg
tcgcgggcgtcgcgttgggctgacccagaccacttcgctcagcggcagacgtgcatgaac
aagttcgccagctggtttggcggcatgccactggtccactcccagatgagactggacccg
cttctgttcaaggaccaggtctccatcctccgcaagaaatacagggacatcgagcgcctc
tga
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