Osmerus eperlanus (European smelt): 134006907
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Entry
134006907 CDS
T10927
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134006907 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134006907 (eftud2)
Spliceosome [BR:
oep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
134006907 (eftud2)
Complex C
U5 SnRNP specific factors
134006907 (eftud2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
134006907
NCBI-ProteinID:
XP_062302011
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All DBs
Position
2:complement(3134148..3144419)
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AA seq
970 aa
AA seq
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METDLYDEFGNYIGPELDSDEDDDLEADARDVDEAEEEDDDEAADADEDVPGMEVVLHED
KKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLTEQELPVTVYDMEFLADL
MDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGIK
STPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSGIRISDGIVLFIDAAEGVMLNTERL
IKHAVQERLAVTICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGMLSTYSTDENLVVSP
LLGNVCFASSMYSICFTLGSFAKIYSDTYGDINYTEFAKRLWGDIYFNPKTRKFTKKAPT
SNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCNR
FFGEFTGLVDMCVQHIPSPKEGAKAKIEHSYTGGLESDLGEAMADCDPDGPLMCHTTKMY
STEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWINVARYQIEVN
RVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELPK
MLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKY
DWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDE
PIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC
VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFH
HWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELA
KQDVVLNYPM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgacctttacgacgagtttggaaactacatcggtcctgaattggattctgat
gaagatgacgatctggaggcagacgctcgagatgtagatgaggctgaagaggaagacgac
gatgaggctgccgatgcggatgaagatgtgccagggatggaggtggtcctacacgaggat
aagaagtattatcctactgcggaggaagtgtatgggccagaggtggaaactatcgtccaa
gaggaagatacacagcccctcacagagcccatcatcaagccagtgaagaataagcagttc
actctgactgagcaggagttgcctgtcacagtttatgacatggagttcctagctgatcta
atggacagtcccgagctgatccggaacgtcaccctctgtggccatctgcatcatggcaag
acatgtttcgtggactgtctgatcgaacagacacacccagagatcaggaagagagatgac
gtggatctccggtacacagacatcctctttactgagcaggagagaggtgttggtatcaag
agtacccctgtcaccatggtgcttcctgactcgagaggcaaatcctaccttttcaacatc
atggacaccccaggtcacgtaaacttctcagacgaggtcacgtccggcatcagaatctcg
gacggcatcgttctcttcatcgacgcggcggaaggagtgatgctgaacacggaacggctg
atcaagcatgccgtccaggagcgtctggccgtcaccatctgcatcaacaaggtggaccgt
ctcatcgtcgagctgaagctgccccccacagacgcctactacaagctccggcacatcgtg
gatgaggtcaacggcatgctcagtacctactccacggatgagaacctggtggtgtctcct
ctcctggggaacgtgtgtttcgccagctccatgtacagcatctgtttcacactaggctct
ttcgctaagatctactctgacacctatggggacatcaactataccgaatttgccaagagg
ctgtggggagacatttacttcaaccctaaaacgcgcaagttcaccaagaaagcccccacc
agtaactcccaacgcagctttgtggagttcgtcctggagcctctttacaagatcctctct
caggtggtgggagacgtggacacgtcgctgccccgcgtgctggacgagctggggatccac
ctgaccaaggaggagctgaagctcaacatcaggcccctgctgaggctcgtctgcaaccgc
ttctttggagagttcaccggcttggtggacatgtgcgtgcagcacattccttccccaaaa
gagggcgccaaggccaagatcgagcacagctacacaggagggctggagtcggacctgggg
gaggccatggcggattgtgaccctgatggccctctgatgtgccacaccactaagatgtac
agcactgaggacggggtgcagttccacgcgtttggccgggtgctgagcggcaccatccag
gcgggccagcctgtcaaggtgctgggagagaattacaccctggaggacgaggaggactcc
caggtctgcaccgtgggacgcctctggatcaatgtggcccggtaccagattgaggtgaac
cgggtgcctgctggtaactgggttctcatcgagggctgtgaccagcccatcgtgaagacg
gccaccatcaccgagccgagagggaacgaggaggcccaaatcttcaggcctctcaagttc
aacacggcgtccgtcatcaagatcgccgtggagcccgtcaacccgtccgagctgcccaag
atgttggatggcttgaggaaggtcaacaagagctacccatcgctcaccaccaaggtagag
gagtcaggagagcacgtcatcctcggcacgggcgagctctaccttgactgcgtgatgcac
gacctgcgcaagatgtactctgagatcgacatcaaggtggccgaccccgtggtgaccttc
tgcgaaacggtcgtggagacgtcgtcgctcaagtgcttcgctgaaacgccaaacaagaag
aataagatcacaatgattgcagagcctctggagaagggcctggcagaggacatcgagaac
gaggtggtgcagatcacgtggaacaggaagaagttgggagagtttttccagaccaagtat
gactgggatttgctggccgccaggtccatttgggctttcggacccgacaccacggggccc
aacatcctggtggacgacaccctgccctctgaggtggacaaagctctcctgggctcggtc
aaagacagcatagtccagggcttccagtggggtaccagggagggacctctctgtgacgag
cccatcagaaatgtcaagttcaagatcctggatgcggtcatcgcccaagagcctcttcac
cggggcggggggcaggtcatccccacggccaggagagtggtctactcggccttcctcatg
gccacccccaggttgatggagccatattactttgtggaggtgcaggctcctgctgactgt
gtgtctgccgtctacaccgtcctggcccggcggagaggccacgtcacccaggacgccccc
atcccgggctcccccctctacaccatcaaggccttcatccctgccatcgactccttcggc
tttgagacagacctgcgcacgcacacccagggacaggccttctctctctccgtcttccac
cactggcagatcgtgccgggcgaccccctggacaagagcatcgtgatcaggcccctggag
ccccagcccgccccccacctggccagggagttcatgatcaagacccggagacgcaaggga
ctgagcgaggacgtgagtatcagcaagttcttcgacgatcccatgttgttggagctggcc
aaacaggacgtggtgctcaactaccccatgtga
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