Osmerus eperlanus (European smelt): 134008946
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Entry
134008946 CDS
T10927
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134008946 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134008946 (smcr8b)
Membrane trafficking [BR:
oep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134008946 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
MINT_RAM7
Motif
Other DBs
NCBI-GeneID:
134008946
NCBI-ProteinID:
XP_062304518
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All DBs
Position
22:complement(13145533..13150951)
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AA seq
935 aa
AA seq
DB search
MIGSPDLLAFTGAEGFGEARERAGELSGVPEELSVPLLPLAHPWAATSSALFLRDFILVA
EFSEQVGPQPVLTIPDDPRILGAFDLNHFSLRIMSVDYQACSPGPSPSGPSPTGPAPRLS
FCEDSRVVMGDWGSFAYVQHLTLYDLEARGFVRPFCLAYVSAEHRKLMEHFLLLSEGLGH
ASDRLKTGNRRAFARELTRKLLDLEYTRSVLQKESEAQSANELAGIERSILEHRDLLRQV
TSFPNRKLKQPDFLPYDTYDPEPHPLTPPSPSYMPRLVKLPPSRRFDRRMKPLEELSDAY
FLSLTLEQLTAVERRLRGDLPSLFTHRITQALTRKYPLNNFLFEPWNPEEGEELQGRDGG
SSGEGLPVPECEGQGPPASLESFFSCVEELSIKLEIGSMGAGQGVEEEEAGETMAGSVSS
GDSIEVLGTEKSYRSQPVAMDTGELRELLGGEGRRVEAGPGHVEAGPGRVEAGPGRVEAG
PGRVEAGPGRVEAGRVRVEAGPGRVEAGPGRVEAGPGRVEAGPGRVEAGPGRVEAGPGRV
EAGRVRAPARRSNSEDSIEVLSTTLIPDDLAAITEETEESPGNAAMEEHCTLAQEETHQQ
PEGCRVNGQQLVPKLRLNLTPAVTPGAVTPGAVTPGAVTPGSRPPGSRPPGSRPPGALPL
TSLEHWSLSCPADKAIDCSSSPCSSEAPSLSSRHHGNAHQRRRRAGLRALRFLHQNSFSQ
HAVFCLLSGRPLLVIGGEERSVQRTVGALALYLPDPGRPSSIVQPCLGRPLSLDDLLTCR
LIGIVRSPGTLFPSMHPSVDHYGRYVALLDLDHRTLRCPPYSGSLIGRLADPRSLIGRGS
TYLLHLESCLTALANQAFVYTFSPALQRPSMLGEEEVVQAERRHHFLCGRGCSSQDDLKV
MDFLSDLIKQRQTGSGPPVLRFSYSPALLHKNTAG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcggttctcccgacctgttggcgttcaccggcgcggagggcttcggcgaagcgagg
gagcgcgcgggagagttgtcgggggtcccggaggagctgtcagtcccgctgctgcccctc
gcgcacccctgggccgccacctcctccgccctcttcctccgggacttcatactggtggca
gagttctctgaacaggtgggaccccagcccgtgctcaccatcccagacgatcccaggatt
ctgggtgcatttgatttgaaccacttctccctccggatcatgtccgtggactaccaagcc
tgctctcctggcccctccccgtcaggtccctcccccacaggccccgccccccgcctcagc
ttctgtgaggactcccgggttgtcatgggagattggggcagctttgcctacgtgcagcac
ctgacgctgtacgacctggaggcccggggcttcgtcaggcccttctgcctggcctacgtc
tccgcagagcaccggaagctcatggagcacttcctgttgctgtcggaggggctaggccac
gcctccgaccggctgaagacaggaaacagacgggccttcgcccgggagctgaccaggaag
ttgctggacctggaatacacacgctcagtcctgcagaaagaatcggaggcccagtcagcc
aatgagctggcaggaatcgagcgttccatcctggagcaccgcgacctcctgcggcaggtc
acttccttcccaaacaggaagctgaaacagcctgacttcctgccgtacgacacatatgat
ccagaaccccacccactgacccccccctccccttcctacatgccccggctggtgaagctc
cccccctcgcggcgttttgaccggcgcatgaagcccctggaggagctgagcgatgcctac
ttcctgtctctcacactggagcagctgaccgctgtggagcgccgtctccgtggcgacctg
ccctcgctgttcacgcaccgcatcacgcaggcgctgaccaggaagtaccccctgaacaac
ttcctgttcgagccctggaaccccgaggagggggaggagctgcagggcagagatggagga
agtagtggggagggacttcctgtgccagaatgcgagggccagggtcccccagccagcttg
gagtctttcttctcctgcgtggaggagctgtcaatcaaactggagataggaagtatgggg
gcgggacagggcgtggaggaggaggaggctggagagacgatggcggggagtgtgagcagc
ggtgacagcattgaggttctgggaacagagaagtcctaccgctctcagcctgtcgccatg
gacactggagaactgagagagttgctgggcggcgaggggcggcgtgtggaggcggggcca
gggcatgtggaggcgggaccagggcgtgtggaggctgggccagggcgtgtggaggcgggg
ccagggcgtgtggaggcggggccagggcgtgtggaggcggggcgtgtgcgtgtagaggct
gggccagggcgtgtagaggctgggccagggcgtgtggaggcgggaccagggcgtgtggag
gctgggccagggcgtgtggaggcggggccagggcgtgtggaggcggggccagggcgtgtg
gaggcggggcgtgtgcgtgcgccagcgcggcgctctaacagtgaggacagcatcgaggtg
ctcagcaccaccctcatccccgacgacctggccgccatcaccgaggagacggaggagagc
cctggaaacgctgccatggaggagcactgcaccctggctcaggaggagacccaccagcag
cctgagggttgccgtgtcaacggtcagcagctggtcccgaagctccgtctgaacctgact
ccggccgtgaccccgggggccgtgaccccgggggccgtgaccccgggggccgtgaccccg
gggtcacggcccccggggtcacggcccccggggtcacggcccccgggggccctccccctg
acttctctggagcactggtcgctgtcctgcccagcagacaaagcaatcgactgctcctcc
tcaccctgctcctccgaggccccctccctctcctcccgtcaccacggcaacgcccaccag
cgcaggaggagggcggggctgcgtgcgctcaggttccttcaccagaactcattctcccag
catgccgtgttctgcctgctcagcgggaggccgctgctggtgattggtggagaggagcgt
tccgtccagagaacggtcggcgccctcgccctctacctgcccgaccccggtcgccccagc
agcatcgtgcagccctgccttggccggcccctcagcctggacgacctgctcacctgtagg
ctcatcggcatcgtcagatctcctggaactctgtttcccagcatgcacccctctgtggat
cattacggtcgctacgtggctctcctggacctggaccacaggaccctgcgctgccctccc
tacagtggctctctgattggccggcttgctgacccccgctctctgattgggcgaggcagc
acctacctgctgcacctggagagctgcctcacggcgttggccaatcaggcgtttgtatac
actttcagccccgccctccaacgtcccagcatgctcggcgaggaggaagtggtccaggct
gagcgtcggcatcacttcctgtgtgggcggggctgcagcagccaggatgaccttaaggtg
atggacttcctttctgacctcatcaaacagcgccagacaggaagtgggcctccggtcctc
cgcttctcttacagccccgcccttctccataagaacacagccgggtag
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