Osmerus eperlanus (European smelt): 134013877
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Entry
134013877 CDS
T10927
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
oep04510
Focal adhesion
oep04518
Integrin signaling
oep04540
Gap junction
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134013877
04020 Calcium signaling pathway
134013877
09133 Signaling molecules and interaction
04518 Integrin signaling
134013877
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134013877
04540 Gap junction
134013877
09142 Cell motility
04810 Regulation of actin cytoskeleton
134013877
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oep01001
]
134013877
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134013877
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134013877
Protein kinases [BR:
oep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134013877
CD molecules [BR:
oep04090
]
Proteins
134013877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Cadherin-like
RIFIN
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
134013877
NCBI-ProteinID:
XP_062309618
LinkDB
All DBs
Position
27:6723981..6743881
Genome browser
AA seq
1049 aa
AA seq
DB search
MEGVRRRSMVLVSVMAALLLSPDKAAGLELSPSLTQAILQINSSFSITCSGWGKVTWRAP
VDPPLDGVQVEDQGATSVLTLENVTAWHSGNYVCQEGMEEDTRDLAIFVPDPDRWFVPTA
GVVMKEEEEGTIPCVASDPRVSVSLYERAGEGPLPGQYQASRGFRAVLNDTAYVCRGTLE
GQERESQVFYVYSIIVPQSVSVHLAASRSLMMQGEALSVNCTATGAEMVFFTWEHPRREK
IEPVTELMSRKKIRSFLSIPDARLEDSGIYSCTVQESVEGHTAKDNLTVMVVERGYVELE
PRQPTRVSVMVDESVEIRVQVEAYPEPSVTWMRHNSTLIGDNVSTKINKVHETRLLSTLT
LVRVKAGQAGLYTIVVANEEEARNVTFTLQVTVPPRILHLSDERGPGQDMLCVTEGVPTP
TINWYSCSSTNRCSDQSTPWQPLTSGPEVVVEDNVTFVEERGLSRVASRLTLNNMAAVTA
LRCEAHNEGGIRARDIRLVSNSLFSQVAVLAAVLALVVIAIIFLIILIALWRKKPRYETR
WKVIESVSSDGHEYTYVDPVHLPYNPAWELPRDSLILGHTLGSGAFGRVVEATVYDLGHN
HTSTRVAVKMLKTTAKRSETQALVSELKIMSHLGPHLNIVNLLGACTKTGPIYLVTEYCR
HGDLVDFLHRNRALFLQSQADQQGVILTEESSPGGGRSGSDGGYMDMSIEQCLEHEAMKE
QSDAIKYADIEPCDYETPCQHSNGYQEQAPVLSLSDSTGLSLPDLVAFAFQVAQGMDFLS
SKNCVHRDLAARNVLVCEGKLVKICDFGLARDLANDNNYVAKGNTFLPVKWMAPESIFHS
LYSSLSDVWSYGILLWEIFSLGGPPYPEIPMNEQFYTALKSGYRMPKPAHASQPMYEVMC
RCWEEKSESRPGFSSLVQTTADLLSDSYRERYIQVSDNFLRSDHPAVARTRPRAADTQAA
DPSEGVELKEAGPSHVAYIIPIPDVTIETIVDVLDTPKEDSDSPQESGLHGDGDPTTSEP
LTPVMQTHPEEEEEPSQSPCTPEEEESFL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtcaggagaaggtctatggtcctggtgtctgtcatggcagccctgctgctg
agtcctgacaaggctgctggtctggagctctcccccagcctgacccaggccatcctccag
atcaactcctctttctccatcacctgctctggctggggcaaagtcacctggagggcacca
gtggacccccccctggatggggtccaggtggaggaccagggcgccaccagcgtcctgacc
ctagaaaacgtcaccgcatggcattctgggaactacgtctgccaggaaggcatggaggag
gacaccagggacctggctatcttcgtaccagaccctgacagatggttcgtcccaacggct
ggggtggtgatgaaggaggaggaggaagggaccattccttgtgtggcgtccgacccgcgg
gtcagcgtgagcctgtacgagcgggcgggcgaggggccactaccgggccagtaccaggca
agccgcgggttcagggcggttctgaacgacactgcctacgtctgcagaggaaccctggag
ggacaggagagagagtcccaggtgttctacgtgtacagcatcatagtcccccagtcagtg
agcgtgcacctggctgcgtctcgaagcttgatgatgcagggagaagctctcagtgtcaac
tgcaccgcgacgggcgcggagatggtcttctttacctgggaacaccctcgtagagagaaa
atcgaaccggtgacagagctgatgtccaggaagaagatccggtcgtttctcagcattcca
gatgccagactggaggattctgggatatatagctgcacggttcaggagtctgtcgaggga
cacaccgccaaagacaacctgactgttatggtcgtagagcggggctacgtggagctggag
ccgagacagcccaccagggtatcagtgatggtggatgagagcgtggagatcagagtacag
gtggaggcctaccccgaaccctccgtcacctggatgagacacaactccaccctgatcgga
gacaacgtctcgacgaaaatcaacaaggtgcatgaaaccaggttgctcagcactctgacc
ctggtgagggtgaaggccggccaggctgggctctacaccatcgtggtagccaatgaggag
gaggccaggaatgtgacctttaccctgcaggtgacagtccctcccagaattcttcacctg
tcagacgagagggggccgggccaggacatgctgtgtgtcaccgagggcgttcccacgcca
actatcaactggtacagctgctccagcactaacaggtgcagtgaccagtccacaccctgg
caacctctgacctctggcccggaggtcgtggtggaggacaacgtgaccttcgtggaggag
agagggctcagtcgggtggccagccggctcaccctaaacaacatggccgccgtcactgcc
ttgcgctgtgaagctcacaacgaaggagggattcgtgcccgggacatacgcctggtctct
aactctctattctcccaggtagcagtactggctgcagtactggctctcgtggtcatcgct
atcatcttcctcatcatcctcattgctctgtggaggaagaagcctcgctatgagacccgt
tggaaggtgatagaatctgtgagctcggacggtcatgagtacacctacgttgaccctgtg
cacctcccctacaaccccgcctgggagctaccccgagacagcctcatcctgggtcacact
ctgggttcgggggcttttggcagggtggtggaggccacggtttatgacctgggacacaac
cacacctccaccagggtggctgtcaagatgctgaagactacagccaagaggagtgagacc
caggctctggtctcagagctgaagatcatgagtcacctgggccctcacctgaacatcgtt
aacctactgggggcctgcaccaagacaggtcccatctacctggtgacggagtactgtcgt
catggtgacctggtggacttcctgcatcgtaacagagcgttgttcctgcagagccaggct
gaccagcagggggtcatcctcactgaggagagctcacctggagggggacgcagtgggtca
gatggaggctacatggacatgtccatagagcagtgtctggagcatgaggccatgaaggag
cagagcgatgccatcaagtacgccgacatcgagccctgcgactacgagacgccctgccag
cacagcaacggttaccaggaacaagctccagtgctgtctctcagtgactccacgggcctc
agcctcccagacctggtggcctttgccttccaggtggcccagggcatggacttcctgtct
tctaaaaattgtgtccacagggatctggcagccaggaatgtgctggtgtgtgaggggaag
ctggtaaagatctgtgacttcggactggccagggacctcgccaacgacaacaactatgtc
gctaagggcaacacattcctgccagtgaagtggatggctccagaaagcatcttccacagc
ctgtactccagcctgagtgacgtctggtcctacggcatcctgctctgggagatcttctct
ctgggaggccctccctacccagaaatccccatgaacgagcagttctacactgcgctgaag
agcggctaccgtatgcccaagcccgcccacgcctcccagcccatgtatgaggtgatgtgc
aggtgctgggaggagaaatccgagtcgaggcctgggttctcctccctggtccagaccact
gctgacctactgtcggactcctacagggagcgctacatccaggtcagtgacaacttcctg
cgcagcgaccatcctgcggtggcgaggaccagaccccgggcggcagacacacaggctgca
gacccctcagagggggtggaactaaaggaggctggcccctcccacgttgcctacatcata
cctatacctgacgtcaccatcgaaaccatagtggacgtgctggacactcccaaggaggat
tcagacagcccacaggagtctggtctccatggcgatggagaccccaccacatctgagccc
ttaacaccagtgatgcaaacccacccagaggaagaggaggagccaagccagtctccctgc
actcctgaggaggaagagagcttcctctga
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integrated database retrieval system
