Osmerus eperlanus (European smelt): 134013877
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Entry
134013877 CDS
T10927
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
oep04510
Focal adhesion
oep04540
Gap junction
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134013877
04020 Calcium signaling pathway
134013877
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134013877
04540 Gap junction
134013877
09142 Cell motility
04810 Regulation of actin cytoskeleton
134013877
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oep01001
]
134013877
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134013877
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134013877
Protein kinases [BR:
oep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134013877
CD molecules [BR:
oep04090
]
Proteins
134013877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
RIFIN
Cadherin-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
134013877
NCBI-ProteinID:
XP_062309618
LinkDB
All DBs
Position
27:6723981..6743881
Genome browser
AA seq
1049 aa
AA seq
DB search
MEGVRRRSMVLVSVMAALLLSPDKAAGLELSPSLTQAILQINSSFSITCSGWGKVTWRAP
VDPPLDGVQVEDQGATSVLTLENVTAWHSGNYVCQEGMEEDTRDLAIFVPDPDRWFVPTA
GVVMKEEEEGTIPCVASDPRVSVSLYERAGEGPLPGQYQASRGFRAVLNDTAYVCRGTLE
GQERESQVFYVYSIIVPQSVSVHLAASRSLMMQGEALSVNCTATGAEMVFFTWEHPRREK
IEPVTELMSRKKIRSFLSIPDARLEDSGIYSCTVQESVEGHTAKDNLTVMVVERGYVELE
PRQPTRVSVMVDESVEIRVQVEAYPEPSVTWMRHNSTLIGDNVSTKINKVHETRLLSTLT
LVRVKAGQAGLYTIVVANEEEARNVTFTLQVTVPPRILHLSDERGPGQDMLCVTEGVPTP
TINWYSCSSTNRCSDQSTPWQPLTSGPEVVVEDNVTFVEERGLSRVASRLTLNNMAAVTA
LRCEAHNEGGIRARDIRLVSNSLFSQVAVLAAVLALVVIAIIFLIILIALWRKKPRYETR
WKVIESVSSDGHEYTYVDPVHLPYNPAWELPRDSLILGHTLGSGAFGRVVEATVYDLGHN
HTSTRVAVKMLKTTAKRSETQALVSELKIMSHLGPHLNIVNLLGACTKTGPIYLVTEYCR
HGDLVDFLHRNRALFLQSQADQQGVILTEESSPGGGRSGSDGGYMDMSIEQCLEHEAMKE
QSDAIKYADIEPCDYETPCQHSNGYQEQAPVLSLSDSTGLSLPDLVAFAFQVAQGMDFLS
SKNCVHRDLAARNVLVCEGKLVKICDFGLARDLANDNNYVAKGNTFLPVKWMAPESIFHS
LYSSLSDVWSYGILLWEIFSLGGPPYPEIPMNEQFYTALKSGYRMPKPAHASQPMYEVMC
RCWEEKSESRPGFSSLVQTTADLLSDSYRERYIQVSDNFLRSDHPAVARTRPRAADTQAA
DPSEGVELKEAGPSHVAYIIPIPDVTIETIVDVLDTPKEDSDSPQESGLHGDGDPTTSEP
LTPVMQTHPEEEEEPSQSPCTPEEEESFL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtcaggagaaggtctatggtcctggtgtctgtcatggcagccctgctgctg
agtcctgacaaggctgctggtctggagctctcccccagcctgacccaggccatcctccag
atcaactcctctttctccatcacctgctctggctggggcaaagtcacctggagggcacca
gtggacccccccctggatggggtccaggtggaggaccagggcgccaccagcgtcctgacc
ctagaaaacgtcaccgcatggcattctgggaactacgtctgccaggaaggcatggaggag
gacaccagggacctggctatcttcgtaccagaccctgacagatggttcgtcccaacggct
ggggtggtgatgaaggaggaggaggaagggaccattccttgtgtggcgtccgacccgcgg
gtcagcgtgagcctgtacgagcgggcgggcgaggggccactaccgggccagtaccaggca
agccgcgggttcagggcggttctgaacgacactgcctacgtctgcagaggaaccctggag
ggacaggagagagagtcccaggtgttctacgtgtacagcatcatagtcccccagtcagtg
agcgtgcacctggctgcgtctcgaagcttgatgatgcagggagaagctctcagtgtcaac
tgcaccgcgacgggcgcggagatggtcttctttacctgggaacaccctcgtagagagaaa
atcgaaccggtgacagagctgatgtccaggaagaagatccggtcgtttctcagcattcca
gatgccagactggaggattctgggatatatagctgcacggttcaggagtctgtcgaggga
cacaccgccaaagacaacctgactgttatggtcgtagagcggggctacgtggagctggag
ccgagacagcccaccagggtatcagtgatggtggatgagagcgtggagatcagagtacag
gtggaggcctaccccgaaccctccgtcacctggatgagacacaactccaccctgatcgga
gacaacgtctcgacgaaaatcaacaaggtgcatgaaaccaggttgctcagcactctgacc
ctggtgagggtgaaggccggccaggctgggctctacaccatcgtggtagccaatgaggag
gaggccaggaatgtgacctttaccctgcaggtgacagtccctcccagaattcttcacctg
tcagacgagagggggccgggccaggacatgctgtgtgtcaccgagggcgttcccacgcca
actatcaactggtacagctgctccagcactaacaggtgcagtgaccagtccacaccctgg
caacctctgacctctggcccggaggtcgtggtggaggacaacgtgaccttcgtggaggag
agagggctcagtcgggtggccagccggctcaccctaaacaacatggccgccgtcactgcc
ttgcgctgtgaagctcacaacgaaggagggattcgtgcccgggacatacgcctggtctct
aactctctattctcccaggtagcagtactggctgcagtactggctctcgtggtcatcgct
atcatcttcctcatcatcctcattgctctgtggaggaagaagcctcgctatgagacccgt
tggaaggtgatagaatctgtgagctcggacggtcatgagtacacctacgttgaccctgtg
cacctcccctacaaccccgcctgggagctaccccgagacagcctcatcctgggtcacact
ctgggttcgggggcttttggcagggtggtggaggccacggtttatgacctgggacacaac
cacacctccaccagggtggctgtcaagatgctgaagactacagccaagaggagtgagacc
caggctctggtctcagagctgaagatcatgagtcacctgggccctcacctgaacatcgtt
aacctactgggggcctgcaccaagacaggtcccatctacctggtgacggagtactgtcgt
catggtgacctggtggacttcctgcatcgtaacagagcgttgttcctgcagagccaggct
gaccagcagggggtcatcctcactgaggagagctcacctggagggggacgcagtgggtca
gatggaggctacatggacatgtccatagagcagtgtctggagcatgaggccatgaaggag
cagagcgatgccatcaagtacgccgacatcgagccctgcgactacgagacgccctgccag
cacagcaacggttaccaggaacaagctccagtgctgtctctcagtgactccacgggcctc
agcctcccagacctggtggcctttgccttccaggtggcccagggcatggacttcctgtct
tctaaaaattgtgtccacagggatctggcagccaggaatgtgctggtgtgtgaggggaag
ctggtaaagatctgtgacttcggactggccagggacctcgccaacgacaacaactatgtc
gctaagggcaacacattcctgccagtgaagtggatggctccagaaagcatcttccacagc
ctgtactccagcctgagtgacgtctggtcctacggcatcctgctctgggagatcttctct
ctgggaggccctccctacccagaaatccccatgaacgagcagttctacactgcgctgaag
agcggctaccgtatgcccaagcccgcccacgcctcccagcccatgtatgaggtgatgtgc
aggtgctgggaggagaaatccgagtcgaggcctgggttctcctccctggtccagaccact
gctgacctactgtcggactcctacagggagcgctacatccaggtcagtgacaacttcctg
cgcagcgaccatcctgcggtggcgaggaccagaccccgggcggcagacacacaggctgca
gacccctcagagggggtggaactaaaggaggctggcccctcccacgttgcctacatcata
cctatacctgacgtcaccatcgaaaccatagtggacgtgctggacactcccaaggaggat
tcagacagcccacaggagtctggtctccatggcgatggagaccccaccacatctgagccc
ttaacaccagtgatgcaaacccacccagaggaagaggaggagccaagccagtctccctgc
actcctgaggaggaagagagcttcctctga
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