Osmerus eperlanus (European smelt): 134017573
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Entry
134017573 CDS
T10927
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03250
Viral life cycle - HIV-1
oep03260
Virion - Human immunodeficiency virus
oep04020
Calcium signaling pathway
oep04060
Cytokine-cytokine receptor interaction
oep04144
Endocytosis
oep04672
Intestinal immune network for IgA production
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134017573 (cxcr4b)
03260 Virion - Human immunodeficiency virus
134017573 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134017573 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134017573 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134017573 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134017573 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134017573 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oep04030
]
134017573 (cxcr4b)
04050 Cytokine receptors [BR:
oep04050
]
134017573 (cxcr4b)
04090 CD molecules [BR:
oep04090
]
134017573 (cxcr4b)
G protein-coupled receptors [BR:
oep04030
]
Rhodopsin family
Chemokine
CXC Chemokine
134017573 (cxcr4b)
Cytokine receptors [BR:
oep04050
]
Chemokine receptors
CXC Chemokine
134017573 (cxcr4b)
CD molecules [BR:
oep04090
]
Proteins
134017573 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
134017573
NCBI-ProteinID:
XP_062313320
LinkDB
All DBs
Position
3:13257128..13259170
Genome browser
AA seq
365 aa
AA seq
DB search
MAYYEGSIIFDSDNSSEESGDFDVDFQGPCERAPNHDFHKIFLPTVYGIIFILGIFGNGL
VVIVMGFQKKCKTSMTDKYRLHLSVADLMFVLTLPFWAVDAASSWYFGGFLCKAVHMIYT
VNLYSSVLILAFISLDRYLAVVRATATNSQATRKLLAGKVIYVCVWLPAAILTVPDLVFA
SSFQVELDMGGSRLSCLRIYPLENNHIWVAAFRFQHILVGFVLPGLVILTCYCIIISKLS
QGSKGQALKRKALKTTVILILCFFCCWLPYCAGIFVDTLMNLEEIPHSCALEQGVMKWIS
ITEVLAYFHCCLNPILYAFLGVKFKKSARNALSISSRSSHKMLTKKRGPISSVSTESESS
SVHYS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcatactacgaagggagcattattttcgattcagacaacagctctgaggagtccggg
gattttgatgttgactttcaggggccgtgtgaaagagcgcctaaccacgattttcacaag
atcttcctaccaacagtttatggaattatcttcattttgggaattttcggcaatggacta
gttgtcatcgtaatgggcttccagaaaaaatgcaaaacttcgatgacggacaagtacagg
cttcatctttccgtagccgacctcatgttcgtcctcacgctacccttttgggcggtggat
gcggccagcagttggtacttcggcggttttctctgcaaagccgtgcacatgatctacact
gtcaacctgtacagtagcgtgctgatactggccttcatcagtctggatcgatacctggca
gtagtgcgcgccacggccaccaacagccaggcaacgagaaagctcctggcaggcaaggtg
atatatgtctgtgtttggctccctgctgctatactcacagtgccagatctggtgtttgca
agtagcttccaagttgagctggacatgggaggctccagactgagctgcctgcgcatttac
ccactggagaataatcacatctgggtggccgcgttccgctttcagcacattctggtgggc
ttcgtcctgcctggcctagttattctcacctgctactgcatcatcatttccaagctgtcc
cagggctccaagggccaggcgttgaagaggaaggccctgaagaccaccgtaatcctgatc
ctatgcttcttctgctgctggctgccgtactgtgctggcatcttcgtggacaccctcatg
aacctggaggagatcccccacagctgtgccctggagcagggggtcatgaagtggatttcc
atcacagaggttctggcttactttcactgctgtctcaaccccattctctacgctttcctc
ggtgtcaaattcaagaaatctgcgaggaacgcactgagtattagcagcagatccagccat
aagatgctgactaaaaaacgtggaccgatctcttctgtatctactgagtcagagtcctcc
agtgtccactacagttaa
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