Osmerus eperlanus (European smelt): 134018985
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Entry
134018985 CDS
T10927
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134018985 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oep01007
]
134018985 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oep03016
]
134018985 (iars1)
Enzymes [BR:
oep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
134018985 (iars1)
Amino acid related enzymes [BR:
oep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
134018985 (iars1)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134018985 (iars1)
Prokaryotic type
Other AARSs
134018985 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
134018985
NCBI-ProteinID:
XP_062315395
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All DBs
Position
1:11165219..11195838
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AA seq
1269 aa
AA seq
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MVEPVPDSINFPSEEERILQFWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDVVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLDIKGPEDVAKMGIAEYNNQC
RKIVMRYAGEWETSVKRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
YSTACSTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVCLIAWTTTPWTLPSNLALCVNP
EFQYVKVKDNATGKVYIMMEARLGGLFKSEGEYTILDKFPGKTLKGKKYKPLFEYFYTKC
QDKGAYTVVTDNYVREEEGTGVVHQAPYFGADDYRVCMEFKIIQRDDAPICPVDASGCFT
AEVTDFAGQYVKDADKNIIKWLKEKGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRV
EHMVEKLLENNDKCYWVPEFVRERRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVV
CVGSMAELEELTGVKVTDLHRESIDDLTIPSRCGKGTLRRVTEVFDCWFESGSMPYAQAH
YPFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQ
KMSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNA
YRFLIQNVQRLQKEEDIAFLYNENTAKQSGNIMDKWVQSFTQSLIQFFKSEMDAYRLYTV
VPKLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEM
MYQNMRHLLHPDSVEEKDASSIHYLMLPQVREGLIDKRIESAVLQMQSVIELGRVIRDRK
TLPVKYPLKEVVVIHQDPEALRDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHM
VLGKRLKGMFKSITASIKELKSEQLEAFQKTGSIVVDGEELHEEDLRLMYTFDQTSGSAT
QYEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGRLVPSAEITVYYSCEPAG
DYLDQVIQAHTDFILATTKAPLKTYPIPKTASLIVQEKTQLKGSDLDLTIVKGASASRAP
LVGPACAFVNLKVKLNNKEQEGVVLLENPKGDNKLDMEKLKFVCGSIFGAGNTRLCVFNG
KTELTSKSDLLALNGKTLSVTSGGSAPGETPSSDSLVCPYVNLQLLDAKPAECQSGDVGT
LLLVNPVGQTGLTHAGLLSETAKVFGLRSRRLKVYLDQDLTEELPANSSVKTLDAKTLYV
KVLSTTAEA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggtagagccagttcctgattccatcaactttccatctgaggaggagcgtattctgcag
ttctggaaggacaaagattgctttcaggaatgtctgaaacaatcaaaaaacaggccaaaa
tacaccttttacgatggaccaccatttgccactggccttccccactatggccacatcctt
gctggcaccattaaagacgtcgtcacccggtttgcccaccagagtggcttccatgtagac
cgcaggtttggctgggattgtcatgggttacctgtggaatatgagatcgataagaccctg
gatatcaagggacctgaggatgtggctaagatgggtattgctgagtacaacaatcagtgc
aggaaaatcgtcatgagatatgctggcgagtgggagacgtcggtgaaaagaatgggcagg
tggattgacttcaagaatgactacaagactctctacccatggtttatggaaactgtctgg
tgggttttcaagcagctgtatgacaagggtctggtctaccgcggggtaaaggtcatgccc
tactctacggcctgcagcacccccctgtccaactttgaatccaaccagaactacaaggat
gtccaagacccgtctgtgattgtgaacttccccctgctggaggacgagaatgtgtgtctc
atcgcctggaccaccaccccctggactctgcccagcaacctggctctgtgtgtcaaccct
gagttccagtacgtcaaggtcaaagacaacgccaccgggaaggtctacatcatgatggag
gccaggctgggaggcctcttcaagtcggagggtgaatacacgatcctcgacaaattccct
gggaagactctgaaagggaagaaatacaagcccctgtttgagtacttctacaccaagtgc
caggacaaaggggcctacactgtggtgacggacaactacgtcagagaggaggaggggaca
ggggtggtccaccaggccccctacttcggagctgacgattatagggtctgcatggaattc
aaaatcatccagagggatgatgctcctatctgccctgtggatgcttccggatgcttcact
gctgaggtcactgactttgcaggacaatatgtgaaggatgcagacaaaaacatcatcaag
tggctgaaggagaagggccgcctggtcaacgccagctccttcaagcacagctacccgttc
tgctggaggtcggacacgccactcatctacaaggctgtccccagctggttcgtccgagtg
gagcacatggtggagaagctcctggaaaacaacgacaaatgctactgggtcccggagttt
gtgcgggagaggcgtttcggtaactggctgagggacgcgcgggattgggccatttctcgg
aaccgttactggggcacgccgatccccctgtgggtcagcgatgactttgaagaggtggtg
tgcgtggggtcgatggcggagctggaagagcttaccggggtgaaagtaaccgatctgcat
cgggagagcatcgacgacctcaccatcccgtcgcgctgcgggaaggggaccctccgccgg
gtgacggaggtgttcgactgctggttcgagagcggcagcatgccctatgcgcaggcccac
taccccttcgagaaccgcaaggagttcgaggacaccttccccgccgacttcatcgccgag
ggcatcgaccagacccgtggatggttctacacgctgctggtgctgtcgaccgcgctcttc
ggcaaaccgccattcaagaacgtgatcgtgaatggactcgtcctcgcaagcgatgggcaa
aagatgagcaaacgcaagaagaactacccagatcctggtctgatagtgcagagctacggc
gctgacgccctgaggctctacctgatcaattctccggtggtgcgggcagagaacctgcga
tttaaagaagacggcgtccgtgacgtcctgaaggacgtgttcctgccctggtacaatgcc
taccgcttcctgatccagaacgttcagaggctgcagaaggaggaagatattgccttcctg
tacaatgagaacaccgccaagcagagtggcaacatcatggacaagtgggtccagtctttc
acacagtccctcatccagttcttcaagtctgagatggatgcctacaggctgtacactgtg
gtgcccaagctcgtcaagtttgtggacatgctcactaactggtacgtgaggacgaaccgc
aggcgtctgaagggagagagcgggaccgaggactgcctgtgggcgctggaaaccctcttc
agtgtgctcttctccatgtgcaggcttatggctcccttcacgcccttcataacggagatg
atgtaccagaacatgcgccacctcctccaccccgactctgtggaggagaaggacgccagc
agcatccactacctcatgctgccccaagtcagggagggtctgattgacaagcgcatcgag
agcgccgtgctgcagatgcagtccgtcatcgagctgggccgggtgatccgggacaggaag
accctgcccgtgaagtatcccctcaaggaggtggtggttatccaccaggaccccgaggcg
ctgagggacatccagtccctgcagaagtacatcctcgaggagttgaacgtacgccagctc
acgctgtccaccgacaaggacaagtacggcatcaggctgagggcggagccggaccacatg
gtgctgggcaagcgcctgaaaggaatgttcaagtccatcaccgcctccatcaaggagctg
aagagcgagcagctcgaagccttccagaagacagggtccatcgttgtggacggagaggaa
ctccacgaggaggacctccggttgatgtacaccttcgaccagacctcaggatccgccacg
cagtacgaggcgcactccgacgcacaggtcctggttctgttggacgtcaccccagaccag
tcgatggtggatgagggcgtggcccgggaagtcatcaaccgcatccagaaactacgcaag
aagggccgcttggttccctctgctgagatcacggtgtactacagttgcgagcctgctgga
gactacctggaccaggtgatccaggctcacacagacttcatcctggccaccaccaaggct
cccctgaagacctaccccatccccaagacggccagcctcatcgtccaggagaaaacccag
ctgaagggctcggacctggacctgaccatcgtgaagggagcatccgcgtccagggcgcct
ctggtgggaccagcctgtgcctttgtcaacctgaaggtcaagctgaacaacaaagagcaa
gagggggtggtcctgttggagaaccctaaaggggacaacaagctggacatggagaagctc
aaatttgtctgcggaagcatctttggggctggcaacacccgactctgtgtgttcaacggc
aagaccgagctgaccagtaaatcggacctcctggccctcaatgggaaaactctgtcagtg
acttcaggaggttccgctcccggagagacgcccagctcggactcgctcgtctgcccctac
gtcaacctccagctcctcgatgcaaaaccagccgagtgtcagagtggtgacgtgggcacc
ctgctgctggtcaaccctgtgggccagaccggcctgacccacgctggcctgctctcggag
accgccaaggtgttcggcctccgcagcagaagactcaaggtctacctggaccaggacctc
actgaggaactgcctgccaactcctctgtgaaaaccctagacgccaagacgctgtacgtc
aaggttttgtcaacgactgcagaagcctga
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