Osmerus eperlanus (European smelt): 134019454
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Entry
134019454 CDS
T10927
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
134019454 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134019454 (ap4b1)
Membrane trafficking [BR:
oep04131
]
Endosome - Golgi transport
Others
AP-4 complex
134019454 (ap4b1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
B2-adapt-app_C
HEAT
PDS5
AP5B1_middle
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
134019454
NCBI-ProteinID:
XP_062316353
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Position
4:22721011..22728820
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AA seq
801 aa
AA seq
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MPYLGGEETVREIRRALANPNVQSDHLRYRNTILRVIRLMSQGVDVSGVFSEMVKACASV
DVVQKKLVYVFLVSYASTTPDLSLLVINTLRKDCQDPNPMVRSLALRNMTNLRLPGLMEY
VEQPLSAGLRDRAACVRRVAVLGWAKIHNLQPNTGIDASIVNELYGLLRDSDPVVMVNCL
RALEEILRDEGGVAINKPIAHHLLNRLQQCDVWGQCEVLRVLQRYQPSSEEELFDILSVL
DPSLLSPPPLGAATLALFLGLCSSLPAAGVSALERAQGPLLAACGSSCREMRFSALCHIQ
LLMRSAPGLMGAHFKRFFCSYAEPAYIKQRKMQVLVELVNDENVSLVLDELKGHCTDVNP
DTAHAAITAIGRIGRSYSDRCLDILTDLLRLKQEHITSAVLQTLGDLVWACPQSSSAVCS
ALEGWEDTLLDTQGRQALLWLLGVYGENVSSAPYLLEGQIDGLRSEVCVEVKMELLTSTL
RLFLYRPAETQDMLGRLLHYCMEEETDMCVRDQAALYYRLLHCGIDETRRVLQGRRSDPS
LGVLIGRPSEPVSQWAGSFNTLAPLCLRAVVPEPATGGCPEQSPPTPNLDLRTLTPCPVP
PPAEDMAQLHHDDEDEDGGDVDGEASLSLSPSLSPEQFEQHWLQEEVCVEVCVGCPAALA
PPSSLQAALQLVNIHTLAFTPPHTRPWRVYLYTHTSHTHLEHTPHTLILGELLCTGEREE
RGGEGEEGEEEGVRGEEGLRRGEEGEKEEGVRKEEREVWRGEREEEGVRVIVKQQPKHEE
ALKVFLSVLTTVLHTVSMETT
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgccctacctgggcggagaggagacggtgagagaaataaggagagctctcgccaacccc
aacgtccagtctgatcacctccgctacaggaacacgatactgagggttattcggttgatg
tcccagggggtggatgtgtcaggggtgttcagtgagatggtgaaggcgtgtgccagcgtg
gacgtggtccagaagaagctggtgtatgtgttcctggtgagctatgccagcacgacccct
gacctctccctgctggtcatcaacaccctgaggaaggactgccaggaccccaaccccatg
gtgcgcagcctggccctgcgcaacatgaccaacctcaggctcccaggtctgatggagtat
gtggagcagcctctgtcagcaggcctgcgtgaccgggcagcctgtgtgaggagggtggct
gtgctgggctgggcgaagatacacaacctgcagcccaacacaggcatagatgcctctata
gtaaacgagctgtatgggttgctacgggacagtgatcctgttgtcatggtgaactgtctc
cgggcactggaggagattttgagggacgaggggggcgtggccatcaacaaacccatcgcc
caccatctcctcaacaggctgcagcagtgtgacgtgtggggtcagtgtgaggtgctgagg
gttctgcagcgctaccagccgtccagtgaggaggagctgtttgacatcctgtcagtgctg
gacccctccctgctcagccccccccctctgggggctgccaccctggccctcttcctcggc
ctgtgctcctcgctcccggccgcgggtgtgtcggcgctggagcgcgcacaaggccccctg
ctggccgcgtgtggaagctcctgccgggagatgaggttctctgctctctgccacatccag
ctcctgatgcggtctgctccaggcctcatgggggcgcacttcaagcgcttcttctgcagc
tacgccgagccggcctacatcaagcagaggaagatgcaggtcctggtggagctggtgaat
gatgagaatgtgtctctggttctggatgaactgaaggggcactgtactgatgtcaaccct
gacactgcccacgctgccatcactgctataggtcgtatcgggcgctcctacagtgacagg
tgtctggacattctcactgacttgctgagactgaaacaggaacacattacctctgcggtg
ctgcagaccctcggggacctggtgtgggcgtgtcctcagagcagctctgctgtgtgttca
gccctggagggctgggaagacacactgctggacacgcagggcaggcaggccttgctgtgg
ctgctgggggtgtacggggagaatgtgagcagcgccccctacctgctggagggccagatc
gacgggctgcggagcgaggtgtgtgtggaggtgaaaatggagctgctcacctccaccctc
aggctgttcctctacagacccgcagagacacaggacatgctggggcgcctgctgcactac
tgcatggaggaggagacagacatgtgtgtacgtgaccaggctgcgctgtactaccgactg
ttgcattgtgggatagacgaaacccgtcgggtcctccagggacggaggtcggatccctct
ctgggcgttctgattggtcggccctccgagcctgttagccagtgggctggcagctttaac
accctggcaccgttgtgcctgagagctgtagttccagaaccagccactgggggctgccct
gagcagagccctccaacccccaaccttgacctccgaactctgaccccctgccctgttcca
cccccagctgaagacatggctcagcttcatcatgatgatgaggatgaagatggtggtgat
gtagatggtgaagcctctctgtccctgtcgccctctctgagcccggagcagtttgagcag
cactggctgcaggaggaggtgtgtgtggaggtgtgtgtgggctgccccgcggccctcgct
cccccctccagcctgcaggcggcgctgcagctggtcaacatccacaccctggccttcact
ccgccacacacacggccctggagggtctacctgtacacacacacctcgcacacacacctg
gaacacacacctcacactctcatacttggggagttgctgtgtaccggagagagggaggag
agagggggagagggggaagagggggaagaggagggggtgagaggggaggaggggttgagg
aggggggaagagggagagaaggaggaaggggtgcggaaggaagagagggaggtgtggagg
ggagaaagggaggaggagggggtgagggtgattgtaaagcagcaaccgaaacatgaagag
gctcttaaagtgtttctgtcagtcctcacaacagtactacacactgtctccatggagaca
acttga
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