Osmerus eperlanus (European smelt): 134021357
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Entry
134021357 CDS
T10927
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134021357 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134021357 (tdg.2)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
134021357 (tdg.2)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134021357 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
MEKK4_N
Motif
Other DBs
NCBI-GeneID:
134021357
NCBI-ProteinID:
XP_062318077
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Position
5:complement(17686666..17690375)
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AA seq
458 aa
AA seq
DB search
MYDSKSTIKMEEKQYTSLTVPTDYLQQWYQSTQQHPQAQHVMQYHNTGHVGQYMDGSRED
RVMTELSVHQELPVHQEFSIHQEFLGHQDLDFHHDFTGHQEPIVQHHHQPADPSQAPTPG
KRKRGRPPKQKLEEGKQQEEYDQNEAIKKAKRALNRFNGMSVAEVMAKTLPDIIAHNLDI
LIIGINPGLLSAFKGRHYPNPGNHFWKCLFLSGLTEEQLNHMHDQSLPDKYGIGFTNMVE
RTTPGSKDLSSKEFREGGRQLVEKLKKYKPLIAAFNGKCIYEIFCKEIFGVKAKNLVFGL
QPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYVKLKELRDKIKGGSPTHREVQETDY
SFDLQLAKDDAKRLAIKEENVDPEYENCGGAHEDAKQSTSYCNIPHTKDTEMARKDHAPA
TGDLPYDQWMTQSFADQIPDISCNSSNVPQPQMGAETF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacagtaaatccacgataaagatggaagaaaagcagtatacgtcactgacggtt
cctacggattatctccaacagtggtaccagtccacccagcagcatccccaggctcagcat
gtgatgcagtaccacaacacaggccatgtgggtcagtacatggatggttctagagaagac
cgggtcatgactgagctgtcagtccaccaggagctgccggtgcaccaggagttttccatt
caccaggagttcctcggtcaccaagacctggacttccatcacgacttcaccggacatcaa
gagcctattgtccaacaccatcatcagcctgcagatccatcacaagctccaactccagga
aagagaaagagagggagacctcccaaacagaagttggaagaaggcaaacagcaggaggag
tatgaccagaatgaggccataaagaaggctaaacgggctctcaaccgcttcaatggcatg
tcagtggctgaggttatggccaaaaccctgccagacattattgcccacaatcttgacatt
ttgataattggtatcaacccaggactgttgtcagcatttaaaggacgccattacccaaac
ccaggcaaccatttctggaaatgtctgttcctttctggtttgactgaagagcaactcaac
cacatgcatgatcagagcctacctgacaagtacggcattggcttcaccaatatggtggaa
aggacaacgccagggagcaaagacctgtcaagcaaagagttccgcgaaggaggtcgacaa
ttggtggagaagctgaaaaagtacaaacccctcattgcagcgtttaatgggaaatgtatt
tatgaaattttctgcaaagagatatttggcgtaaaggccaaaaatcttgtatttggccta
caaccgtacaaaataccagaaacagaaacagtgtgttacctgatgccctcatcgagtcca
cgctgtgcccagttcccccgcgctcaggacaaggtgcacttttatgtcaagctgaaggag
ctaagagacaagattaaaggggggtcaccaacacaccgggaggtgcaggagactgactat
tcctttgacttgcaacttgccaaagatgatgctaagaggctggcaatcaaggaggaaaat
gtagatccagagtatgagaactgtggtggggcacatgaagacgcaaagcaaagcaccagc
tactgtaatattccccacaccaaagacacagaaatggccagaaaagaccatgcccctgca
acaggcgacctgccatatgaccagtggatgacacagtcgttcgccgaccaaataccggac
atcagctgtaacagtagcaatgtacctcaacctcagatgggagcagaaacattctga
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