Osmerus eperlanus (European smelt): 134021523
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Entry
134021523 CDS
T10927
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase isoform X1
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00592
alpha-Linolenic acid metabolism
oep01040
Biosynthesis of unsaturated fatty acids
oep01100
Metabolic pathways
oep01212
Fatty acid metabolism
oep03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
134021523 (fads2)
01040 Biosynthesis of unsaturated fatty acids
134021523 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134021523 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oep01004
]
134021523 (fads2)
Enzymes [BR:
oep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
134021523 (fads2)
Lipid biosynthesis proteins [BR:
oep01004
]
Desaturase
Front-end
134021523 (fads2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
CHS4
CHDNT
Motif
Other DBs
NCBI-GeneID:
134021523
NCBI-ProteinID:
XP_062318437
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Position
5:complement(19849238..19852634)
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AA seq
447 aa
AA seq
DB search
MGLGKHLKDPDSTNNDKQGGGNVFTWEEIQRHTNKNDQWLVIDRKVYNITNWTKRHPGGI
RVISHYAGQDATEAFTAFHPDSTFVRKFLKPLLVGELSASEPCHDHDKSATIVQDFRNLR
DHAEKEGLFQAKPLFFCLHLGHILLLEVLALLLLWTCETNWTSTLLCCVILATSQSQAGW
LQHDFGHLSVFKKSRWNHLLQKFTIGHIKGASACWWNHRHFQHHAKPNVIRKDPDINMLH
MFVLGDTQPVEYGIKKLKYLPYNHQHKYFFFVGPPLLIPVFFHIQNLKTMFSHRLWEDVA
WWITFQIRYFLCYVPFFGFLGSVLLLSGVRFLESHWFVWVTQMSHISKDIEYDNHQDWLT
MQLNSTCNIEQSAFNDWFSGHLNFQVEHHLFPTMPRHNFHRIAPMVRALCKKHGLSYEVK
TLGQGFADVVRSLKKSGNLWLDAYLHK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcgggaaacatttgaaagacccagactccacaaacaatgacaagcaaggaggt
ggtaatgtcttcacctgggaggagatacagaggcatacgaacaagaatgatcagtggctc
gtcattgacaggaaagtgtacaacatcaccaactggaccaagaggcatcccggcggaata
agggtcatcagtcactatgcaggacaggatgccacagaagcattcacggcttttcatcct
gattcaacctttgtgagaaaatttctgaagcccttgttggttggtgagctgtcagcatct
gaaccctgtcatgatcacgacaagagtgcaactattgttcaggacttccgtaacttgcgt
gaccatgcagagaaagaggggctgtttcaagccaagcctctttttttctgtctccacctg
gggcacatattgctactggaagtcctggctttgctgcttctgtggacctgcgaaaccaac
tggacttcaacactgctttgctgtgtcattctggccacgtcccagtcccaagctggatgg
ttgcagcatgattttggccacctgtctgtcttcaagaagtccagatggaatcatttactt
caaaaatttaccattggtcacataaagggagcttctgcctgctggtggaaccatcgtcac
ttccagcatcatgccaagcccaatgtgatccgtaaggaccctgacatcaacatgctccat
atgttcgtattgggagacacacagccagtggagtatggaataaagaagctcaagtacttg
ccttacaaccaccaacacaaatacttctttttcgttggcccccctctgcttattccagtg
tttttccacattcagaacctaaaaactatgttttcacatcggctctgggaggacgtagcc
tggtggataacctttcaaattcgctacttcctatgctatgttcccttctttggttttctt
ggttcagtccttctattaagcggtgtcaggtttctggagagccactggtttgtatgggtg
acacagatgagccacatttcaaaggacattgaatatgacaaccatcaagactggctgacc
atgcagttgaattccacctgcaatattgagcagtcagccttcaatgactggttcagtggg
caccttaactttcaggttgaacaccacctgttccccaccatgccccgtcacaacttccat
cggattgctccaatggtgcgtgctttgtgtaagaaacatggcctttcctacgaggtcaag
acattgggacaaggtttcgcggatgttgtgagatcactgaagaagtctgggaacctctgg
cttgatgcttatctacataaatga
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