Osmerus eperlanus (European smelt): 134022051
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Entry
134022051 CDS
T10927
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04060
Cytokine-cytokine receptor interaction
oep04672
Intestinal immune network for IgA production
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134022051 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134022051 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134022051 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oep04052
]
134022051 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134022051 (cxcl12a)
Cytokines and neuropeptides [BR:
oep04052
]
Cytokines
Chemokines
134022051 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Chemokines
134022051 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
YfhP_C
Motif
Other DBs
NCBI-GeneID:
134022051
NCBI-ProteinID:
XP_062319214
LinkDB
All DBs
Position
6:complement(6271683..6278972)
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AA seq
98 aa
AA seq
DB search
MDLKLLALMAVLTVVTYVPVSHAKPLSLVERCWCRTTASTVPQRSIRELRFLHTPNCPFQ
VIAKLKNNKEVCINPETKWLQQYLKNAINKMKRSKQAN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattattggcgttgatggctgtgttaacagtggtgacgtatgtgcctgtt
tcacatgccaagcccctcagtctggtggagaggtgctggtgtcgtacgacagccagcacc
gtcccccagcgcagcatccgggagctaaggttcctacacactcccaactgccccttccaa
gtgatagccaagctgaagaacaacaaggaagtgtgtatcaacccagagaccaagtggctg
cagcagtacctgaagaacgccataaacaagatgaagagatccaaacaggccaactag
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