KEGG   Osmerus eperlanus (European smelt): 134022296
Entry
134022296         CDS       T10927                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134022296 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oep03041]
    134022296 (smndc1)
Spliceosome [BR:oep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    134022296 (smndc1)
 Complex B
    134022296 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    134022296 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 DUF2067
Other DBs
NCBI-GeneID: 134022296
NCBI-ProteinID: XP_062319691
LinkDB
Position
6:complement(13865704..13868349)
AA seq 237 aa
MSDDLMKQLSSYKAQLQQVEAALSTDQDNEDLMKLQKDLQEVIELTKDLLTAQPAEGASS
ASSDAAPLKHNWKVGDRCMAVWSQDGQVYEAEIEEIDGENSTAAVTFAGYGNAEVIPLQN
LKPSEEGRHSDDEGMGKPKSRKEQIAEQREYKKKKAQKKVLRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggacgacttgatgaaacagttaagcagctacaaagcccagttacaacaagtggaa
gctgccttatccaccgaccaagataatgaagatttgatgaaattgcagaaagacttgcag
gaagtcattgagttgactaaagacctgctgacggctcaaccggctgagggagcctccagt
gccagctcagatgctgcacccttgaaacacaactggaaagtgggggataggtgtatggcc
gtatggagccaggatggacaggtgtatgaggctgagattgaagagatagacggggagaac
agcacggcggccgtcaccttcgccggctacgggaatgccgaagtgatcccactgcagaac
ctcaaaccgtccgaggagggaaggcatagcgacgacgaagggatgggcaaacccaagtcc
aggaaggagcagattgcggagcagagggagtacaagaagaagaaggctcagaagaaggtg
ctgaggatgaaggagctggagcaggagagggaggatcagaagtcgaaatggcagcagttt
aacaacaaagcttactccaagaacaagaaaggacaggtcaaaaggagtatatttgcatct
ccagagagtgtgaacggaaaagtgggagttggaacgtgtggaattgctgataaacccatg
acacagtaccacgacacatccaaatacaacgtcaggcatctcatgccacaatga

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