Osmerus eperlanus (European smelt): 134024506 Help Entry 134024506         CDS       T10927                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism oep  Osmerus eperlanus (European smelt) Pathway oep04115   p53 signaling pathway oep04145   Phagosome oep04148   Efferocytosis oep04350   TGF-beta signaling pathway oep04510   Focal adhesion oep04512   ECM-receptor interaction oep04820   Cytoskeleton in muscle cells Brite Membrane trafficking [BR:oep04131]  Endocytosis   Phagocytosis    Opsonins     134024506 (thbs1b) Glycosaminoglycan binding proteins [BR:oep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    134024506 (thbs1b) BRITE hierarchy SSDB OrthologParalogGFIT Other DBs NCBI-GeneID:  134024506 NCBI-ProteinID:  XP_062322951 LinkDB All DBs Position 8 AA seq 1171 aa AA seqDB search MKLTGIFLLLMLWNCESARVAESRDDNSVYDLFELVQVPKKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPENSFRDLIDSIHEERGFLLLLNFKQFKRTRGSLLTVEKLDGSGPVFEIIS NGKANTLDVVFSTENKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PVQSILTHEISTSARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSIMTDTI TLDNPINGSSPAIRTDYTGHKTKDLQMICGFSCEDLASMFKELRGLGVVVKELSNELRKV TDENKLLMNRVGIHSGVCLHNGIVHKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGQDCQGEGR QTEKCQKSPCPINGNWGPWSPWDTCSVTCGGGAQTRKRLCNNPVPKYGGKECMGEAKDSQ LCNKNSCPIDGCLSNPCFAGAKCTSFPDGTWKCGKCPTGYSGNGIKCKDIDECKEVPDAC FEFNGVHRCENTDPGYNCLPCPTRFSGPQPFGKGVEEAAAKKQVCAPRNPCLDGSHDCNK NARCNYLGHFADPMFRCECKPGYAGNGHICGEDTDLDGWPNSDLVCVENATYHCKKDNCP NLPNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIYNPRQFDYDRDDVGDRCDNCPY NSNPDQTDTDSNGEGDACSLDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLE HNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDVCDHDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKMVNSTTGPGEHLRNA LWHTGNTPGQVKTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttttactcttgatgctctggaactgcgagagcgcacgagtt gcagagagtcgggacgacaacagtgtgtacgacctgtttgaactggtccaagtccccaag aaaaaccacggggtcaccctcgtgaagggcgacgatccatacagccccgcctacaagatc ctcaacccagacctgatccccccggtacccgagaactccttcagggacctcatcgattcc atccacgaggagagggggttcctcttgctgctgaacttcaagcagttcaagaggacaaga ggaagcctccttaccgtggagaagctggacggttccggccccgttttcgagattatttcc aacgggaaggctaacaccttggatgtggttttctccaccgagaacaagcagcaggtggtt tccattgaggacgtggacttggcgacggggcactggaagaacatcactctgttcgtgcaa gaggaccgcgcgcagctctacgttgggtgcgaggaggtcaacaccgccgagctggacgct ccggtccagagcatcctcactcatgagatatcaaccagcgcgcgcctccgcattggcaag ggagcagtgaaagaccgatttatgggagtgcttcaaaacgtacgctttgtgtttggaacg acccttgatgccattctgcgcaacaaaggatgccaaaactcaatcatgactgataccatc actctggacaaccccatcaatggatccagccccgctattagaaccgattacacaggccac aaaaccaaagacctgcagatgatctgtggtttctcctgtgaggacctggccagcatgttc aaggagctgaggggcctgggggtggtggtgaaggagctctctaacgaactgcgcaaagtg acggatgagaacaagctgctgatgaaccgcgtcggcatccacagtggcgtctgtctgcac aatggcatcgtccacaagaacaaggatgagtggaccgtcgatgactgcacggagtgcact tgtcagaactccgccacggtgtgccgcaagatctcctgccctctgatcccctgtgccaac gccaccgtgcccgatggggagtgctgccctcgctgtggaacaccgagtgactacgcggag gacggctggtccccctggtctgaatggacccactgttctgtgtcgtgtgggcggggcatc cagcagcgaggtcgctcctgcgaccgcatcaacaacaactgcgagggcacgtcggtgcag acccgcgactgctacctccaggagtgcgacaaacgcttcaagcaggacggcagctggagc cactggtcgccctggtcctcctgctcggtgacctgcggcgcgggcgtcatcacccggatc cgcctttgcaactcccccacgccccagctgggtggccaggactgccagggcgagggacgc cagaccgagaagtgccagaagtctccgtgccccatcaatggcaactggggaccctggtca ccgtgggatacctgctctgtcacctgcgggggaggggcccaaactcgtaagcgtctgtgt aacaaccctgtgcccaaatatggtggaaaggagtgtatgggtgaagccaaagactcacag ctatgcaacaagaacagttgtcccatcgacggatgcctgtctaatccctgctttgccgga gccaagtgcaccagcttccctgatgggacctggaaatgtgggaagtgcccaactgggtac tcaggaaacggcatcaaatgcaaggacatcgacgagtgcaaagaagtgcctgacgcttgc tttgagttcaacggtgtgcacaggtgtgagaatacagaccctggctacaactgtctgccc tgcccaacccgcttctccggtcctcagcccttcggcaaaggcgtggaggaggcagccgcc aagaagcaggtgtgcgcgccacgtaacccctgtctggacgggagccacgactgcaacaag aacgcccgctgcaactacctgggccacttcgctgaccccatgttccgctgcgagtgcaag cctggctacgccgggaacgggcacatctgtggggaggacacggacctggacggctggccc aactcagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgtccc aaccttcccaactctggccaggaagactacgacaaggatggcattggtgacgcttgtgac aacgacgatgacaatgatggtatccctgacgacagggacaactgcccgttcatctacaac cccaggcagtttgattacgaccgtgacgatgttggtgaccgctgcgataactgcccgtac aacagcaacccagaccagacagacactgacagcaatggagaaggagacgcctgctcgctg gacatcgatggagacggaattctgaacgagaaggacaactgcccctatgtgtataacgtc gaccagagggacacagacctggatggcgtgggtgacatgtgtgacaactgccctctggag cataatcctgaccaggtggactctgatgacgatcgcgtgggagacaagtgcgacagcaac caggacatcgacgaggatggccaccagaacaacctggacaactgcccctacatccccaac gccaaccaggccgaccacgacaaggacgggaaaggagacgtctgcgaccatgacgacgac aacgacggtatccctgacgacaaagacaactgcagactggcctttaaccctgaccagctg gactctgatggtgatggtcgcggcgatgcctgcaaggatgacttcgaccaagacaacgtg cctgacatctacgacgtttgtcctgagaactttgacatcagcgagacagacttcagaaag ttccagatggttcctttggaccccaaaggcacctcacagatcgaccccaactgggtggtc cgccaccagggcaaagaactggtgcagacagtcaactgcgaccctggcattgctgttggt tttgatgagttcaactctgtggacttcagcgggacgttcttcattaacacggagagggac gatgactatgccggcttcgtgtttggataccagtcaagctccaggttctacgtggtaatg tggaagcagatcacccagacctactggtccaacaagcccaccaaggcccagggttactca ggcctgtccatcaagatggttaactccaccacaggaccgggagagcacctgaggaacgcc ctgtggcacacagggaacacacctggacaggtgaaaactctgtggcacgacccaaagaac attggatggaaagactttactgcctacagatggcatctaatccacagaccaagaacagga cacatcagagtggtgatgtatgagggcaagaagatcatggctgactctggaagtatctac gataagacgtatgctggtggacggctaggtctttttgtcttctctcaggagatggtatac ttctcagacctcaagtatgaatgcagagatgcataa

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