Osmerus eperlanus (European smelt): 134026752
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Entry
134026752 CDS
T10927
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04140
Autophagy - animal
Brite
Membrane trafficking [BR:
oep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134026752 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
134026752
NCBI-ProteinID:
XP_062325669
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All DBs
Position
9:6524716..6531991
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKTDVTVEGECPLLAATFAYWDNILGPRVRHIWVPRCEQSLFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQA
ELGFYLPLHTVCVERLKHIIRKGRIWMQKGYNIISVLSSEIVPIMELLSSMKTHSVTEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPDKVNKIVRTLCLFLTPSE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYNQRRYIRSELSALWRAVSEEEITPEAFIHTAETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
MVEGDLNIIMAFAEKLRAGLHSFVFGKPFYTSVQERDALMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggttgcccaccccagtcaccagctgtggccaaaacagacgtcaccgtagag
ggtgaatgccctctccttgctgccacatttgcctactgggacaacatcctcggcccacgc
gtccgtcacatttgggtacccagatgtgagcaatcgctgttcttaagcgatggagaggtg
accttcttagccaatcacacgctgaacggggagatcctacgcagcgcggagtgcggggcc
gttgacgtcaagttctttgtgctggcagagaaaggcgtcatcatcgtgtcacttattttc
gatggtgaactgaaaggtgacaagaacacgtgtgccttgtcaatcatcttgccacaagca
gagttgggcttctacctgcctctgcacaccgtctgtgtggagaggctcaaacacatcatc
cggaagggacgcatctggatgcaaaagggctacaacatcatctcagtgctgtcatcagag
attgtccccattatggagctactgtcctcaatgaagacacacagcgttactgaggacata
gatattaaagacactgtcctaaatgatgacgacattggggacagttgccatgaggatttc
ctgcacaaagccattagctctcacctccaaacctgtggctgctcaatggtggttggaagc
aacccggacaaagtgaacaagattgtgcgtaccctgtgtctcttcctcaccccttctgag
aggaagtgttcccgtctgtgcaaggctgactcatctttcaaatacgacactgggctgttt
gtccagggcctcctcaaggattccaccggcagctttgttctccccttccgccaggtgctg
tactctccctacccgacaacgcacatcgacgtggacatcaacaccgtgaagcagatgccc
ccatgccatgagcacatgtacaaccagcgccgctacatccgctctgagctcagtgccctc
tggcgtgccgtcagcgaagaggagatcacgcccgaggccttcatccacactgctgagacc
ttcaccccggatctaaacatctttcaggatgtcatgcacaaagacaccctcgttaagtct
tttatagatgaggtgttcatgctgaagcccggcctctccctgcggagcacatacttggcc
cagttcttgctcctgctccacaggaaggcgctcacgctgctcaaatacatcgaggacgag
acgcaaaagggaaagaagccattccgctccttgcgcaacttgaagacagatctggaccta
atggtagagggtgacctaaatatcatcatggcctttgctgagaagttgagggcaggtctg
cactcttttgtttttggaaaacccttctacaccagcgttcaagagcgggacgcactcatg
agcttttga
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