Osmerus eperlanus (European smelt): 134027743
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Entry
134027743 CDS
T10927
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03320
PPAR signaling pathway
oep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134027743 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134027743 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134027743 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oep03310
]
134027743 (nr1h3)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134027743 (nr1h3)
Nuclear receptors [BR:
oep03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
134027743 (nr1h3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
134027743
NCBI-ProteinID:
XP_062326775
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Position
10:complement(9955402..9967724)
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AA seq
454 aa
AA seq
DB search
MSTLSATDFTDVGHGESKVLECTGDKSGTIEVKNEIVLPLDLPPPSKFSSPSQNGPLLAE
MSNPLHMEPSDMKSDPAAGDIPANTDGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNV
LSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGMREQCVLSEE
QIRLKKMKKQHEDETARPSAVVTPTLPLEVPTLAPEQLEMIEKLVAMQKQCNKRSFIDRP
KVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTS
TIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDE
AEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLMFPRMLMKLVS
LRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacactctctgcgactgacttcacagatgttggtcatggtgagagtaaggtgttg
gaatgcacgggtgacaagagcggcactatcgaagtgaaaaatgaaattgtccttccactg
gatctgccccccccttccaagttttccagtccctcacagaatgggcccttgctggctgag
atgagcaaccctctgcacatggagcccagtgacatgaagtcagatccagcagcaggagac
atacctgcaaacactgatggccagccagtgaagaggaagaaagggccagctcctaagatg
ctggggaacgaagtgtgcagtgtctgtggggacaaggcttcaggtttccactacaatgtg
ctgagctgtgagggctgcaagggtttcttccgccgcagtgtcatcaagagcgcccagtac
tcgtgcaaaaacaacggccgctgtgagatggacatgtacatgcgacgcaagtgccagcag
tgccgcctgcgcaagtgccgtgaagcaggcatgcgagagcagtgcgtactgtctgaggag
cagatccggctaaagaaaatgaagaagcagcacgaggacgagaccgcgcgcccgtcggcg
gtggtgacacccaccctgccgctggaggtgcccacgctagctcccgaacagctggagatg
attgagaagctggtggccatgcagaagcaatgcaacaagaggtccttcattgaccgaccc
aaagtcacaccctggccgcagagtcaggacccacagaacagagaggtgcggcagcagcgc
tttgcccacttcacagagctagccatcatgtcggtccaggagatagttgattttgctaag
cagcttccaggtttcctggagctaactcgagaggaccagattgccctgctcaaaacctca
accattgagatcatgctgcttgagacatcacggcgatacaaccctgcaattgagagcatc
acgtttctaaaggatttcagttataacaaagaggattttgccaaagcagggcttcagttt
gagttcattaacccaatctttgagttctccaagggaatgaacgacctgcacctggatgag
gcggagtatgctctgcttatcgcaatcaacatcttctctgcagatcggcccaatgttcag
gatcatgacctagtggaacgtcttcagcaaccgtatgtggatgcactgcgctcttacatc
atgataaagagaccaaacgaccacttgatgtttcctcgcatgctcatgaagctggtgagt
ctccgcactctcagcagtgtccactcagagcaagtcttcgcactacgccttcaagacaag
aaactccccccactgctttctgaaatctgggatgtccatgagtga
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