Osmerus eperlanus (European smelt): 134029134
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Entry
134029134 CDS
T10927
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134029134 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134029134 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
134029134 (si:ch1073-335m2.2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
134029134
NCBI-ProteinID:
XP_062329123
LinkDB
All DBs
Position
1:25724551..25746967
Genome browser
AA seq
3268 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDNPPSSSHGRDVAGFSRGAVGPVFGPPV
SLHSREGRYERRIDGTSDSRERAYDHSPYGHHERGGTFDRQRHYNADYYRDRSMFAAGPG
PGGSAISGSFDTPEPHFEPRIRDPFTLTSGSRRDLYREDRGRRVDRTYHHRRSRSSHSSQ
SRHPSPQRTTGQTPKAPNSPKRAPLSPGRTPHSRSHSRSSSSDSVSSTSSTGSGSSDSNS
SSSDGSRARSVQSSATHGPPSQPSMGLDTDEPRRSFGIRVQNLPVRSTDTSLKDGLFHEF
KKHGKVTSVQIHGASEERYGLVFFRQQEDQEKALTVSKGKLFFGMLIEVTAWNGPETESE
NEFRPLDGRIDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGVPQYA
FVQYSDIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTTCVWLDGLASNITDQYLTRHFCR
YGHVVKVVFDRLKGMALVLYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRSM
QASGQDIREIRDIYEIPTERREERRPPYHEFTAERAYYENVRTPGVYPEDPRRDYPARSR
ERFTELEHYQGDHFDPRFHEDPREYRDYRDPFEQDIRKYTYIQRERERERERFEADRGRW
SPSHGRRPITPAVSPSPSERAPRDSERRVYSQSSERSGSCSSLSPPHFDKADKTPLEHGA
KTDRLDKDTQPAPAERGPGAEKSKRGRRKEKADKEKGEKIKLRKGKVQSPSVPPTETELE
TSLEAGFGRGKVSDQDSIERQRYKGDSDPSTNQTASTSRHDPLKSERLDMVKAEGVEVDG
KSRSKKHQKADVGNDGKDVSVDSDRLAARKRRFGDASGKTIRQKRSRLEDEDGNQIPDFG
PSTAVDSDGKLKDPHRRDSRSKTERMVFLSSHKEGQDSGARGQGEPSEGPIEPVDLNRLP
GNITSRRYSHEGSVDQETKDQEQHAVFKYGAPTTDNDKSGKEREEHVDIDLSQSYRKQME
QNRRLHQQLQESDKSEKPGSPLGVETDDLEPRSLVHEVGKPPQDVTDNFPSHKLKKLDQF
DMQDASSKKERVYRRQKSEDPEWNSTASLGLQHFSHHADDEFADFSHLREVKAEDKVHPD
LELADKRAHTTQISKPSTPLHGSDEDQQKRWESRVKQDLLPDLNFSRSLGKNLHNRKRLE
YGIGHDLEPGEVRSDSEEDRENKPHSPMPSTSVPFSERPRGDRFSDPKLATLERNKFYSF
ALEQTITPDTKALLERAKCLSSSREDNWSFLDYDSHFAGLRSQKDIEKVEPTPRPTPSWY
MKKKKIRSGSEDKVDDRKEEPKPEEHERRELFASRFLHSSIFEQDSRRLQHLERRHEDPE
HGQSQQTGQQGTADTQPDSEPVVLFHSRFLELTRLQQQKGKDQLQQEVKRGNLVDENKTE
KPIDQEPQPLQVPKVAEPLLEPDIKPVSPAEEPPLVLNLGVSLAPKEMSPQDEKRVIRSP
SPDILPVSMVKEENKYNKQQSSTPPYPQVEIPPPAAEGVVAPEPAPPPGKFKSSPSEEKS
EDVTPVVKSLMVESPCDIDGGTQEASVSGSEPELEPGLEQATSELTELKVPSLPDTAEEM
DVSKSYTVKTETHSDTENKLDQDKMPVYVEASEEPVSPPQKTKNKKSKSSPIQVAPAPFT
SVSSTEKPVTRKSERIDKEKLKRASSPRGESSKISSDSKSTAKSPIHGADCEQGSEQSIS
TGRARRRNVKSVYATPLDDETRTGKDASESPRSARKRGGDKDAPPQQNEEQDSLVPNTSK
RGRPPKNRRQGYDASSRKGDRSKMDTKDIDSNESESGEKIPKASKGRHSPYAYKGSGQVA
QSGSSKGEKSDIPDDVQQQTDISEDDSLAPQDPLVSKDNSSLHDVTKKEEKVKQLVTDKK
DQDKNNPPEDEAFGSVSSEKGVEALVIDEQPSLEDKKTVRGKSAKLTRTPKSPVLKNLKI
RLNVTEVKDLLQLGDDEAGNQDDYLKKTKPSDSNDQLLECSQSKEESPSNEDNEEEMPDA
QPPLDPSQELELVQAVENIAKLTGPTLPTDPHPPTPPVPATEVKCDTEKPNNPASENELM
AAIDSITAEEATVPLAQDPVIAPAAVESDSEMNASFQPVKGIEPTIQTSSSPGEAPFPST
PKKNLKGRAKTPKRPKSQKPSKKEPSKESLSEPESSSIATSDSTSSNTQTIVECHSSSAG
VITATSWKPEPEPLVAKVADGTAESKVLPVEPPQHIKPVYPSTKSPNCPKPQQPPPECIS
PSLSPPPSRPSVRPLQPSRIPVSPPDWCSQSKDIGFLSAVLPGPFENQSPPSDHEGLDPD
HNTSDLRRILIKNKNVSLPGIGSLSGNLAIPTPNNPHISENTTQPTTLVAVPNKIPLSES
RLPTHPAQPIVRPPASLPSPETKSVVSVIASTATSVISRVCNPPDLEEKGNATGANPGME
MQLPKPTYRSSMEDGGSYHGPSVGEEGGSAGRFLVESSTLSTGSNPGLRVNTSEGVVVLS
HSGQKREGPLRLFAKISQIPPATAVDMESQQLVSMPQIKQEMYTHPQSSTPKCPPTSADH
GHPAKTQQAVSSIKQENTGLEKMESHYQPGTQGGVVKRLQQAVGGQQVIGYHHSDFTMLL
KHPKKVEGADALNSDGGKLSWTSAISPAISPHLPSPAGNHVGFVSATAGDRTPSHLSGVK
QEPRSPRKSAHPHSPFSSQIGSSSPKGIPVMLTSGLPTMQQYVTSVHHPEQSVIMPPHSA
HGALGRMSPHRGAQNIPMAHLVQGEVRVNTPPLSAMSFGIHGEPLASPWSGPMQQRPTSP
QTVGRDMVLKVNPGTVRSHDGEQEDPRRFHPAAGRPSATQVKPETMQPDPRAALRSGMQM
DQYITSPRDVRVVMHHPQGERAGPEPHAGGHVQETLPPSSTSSSIASSMSPRAHLLSKGV
SEKDGPKPLEAKRPHSPSKDGMMGIRTPVSAIASPQRVQLMASGTGSSFPEYSTIYSNPR
GIHSQVTESSTVGIQAPVNITSALGGEHSQAQTGHQPVNMVQLLTKYPIVWQGLLALKND
TAAVQLHFVCGNKALAVRSLPPPLPEGGQLLRIVQRMRLEASQLEGVARRMTGESEFCLL
LALPCGRDQDDVLNQTQTLKAAFINYLQAKLAAGIINVPNPGSNQPAYVLQIFPPCEFSE
SHLSRLAPDLLNRISSISPHLMIVITTV
NT seq
9807 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgagaggag
aaaattgtcgaacattttaaacgctatggacgtgtcgagagtgttaaggttcttcggaag
cggggttccgagggtggcgttgcggcctttgtggattttgtggatatcaaaagtgcacag
aaggctcacaatgctgtcaacaagatgggggacagggaccttcgcactgactacaatgaa
ccagggtctgttcctagtgctgttcggggcctggaagacaacccgccctctagcagtcat
ggacgggacgtagcaggattctctaggggggcagtgggtccagtgtttggccctcctgtg
tctctccactccagagagggacgttatgaacggagaatagacgggacctcggacagccgg
gagcgtgcgtatgatcacagcccttacggacatcatgaacgtggtggcacttttgacagg
cagcgtcactacaatgcagactattatcgcgatcgttccatgtttgcagctggcccgggc
cctgggggcagcgctatcagtgggagctttgacaccccagagccccatttcgagcccaga
atccgagacccttttactttgaccagtggttcacgtcgtgacctctatagagaagacagg
gggcgcagagtggacagaacttaccatcaccgccgtagtcgctcgtctcattcctcacag
tctagacacccttcccctcaaaggaccacgggacagacacccaaagcccccaattccccc
aaaagagcccccctttccccggggagaactccacactctcggtcccacagtcggtcatct
agttccgattcggtcagcagcacgagcagcacgggcagtggcagcagcgattcaaacagc
agctcaagtgatggttctcgtgctcgttcggtacagtcctctgccacacatggccctccc
tctcagccttccatgggtctggatacagatgaaccacgcagaagctttggaataagggtg
cagaaccttccagtgcgctccacagacactagtttgaaagatggactcttccatgagttc
aagaaacatgggaaagtgacatcagtgcagatccatggggcctctgaggagcgatatggc
cttgtgttcttcaggcagcaggaggaccaggagaaggctctcactgtctccaaaggaaaa
cttttctttggcatgctcatcgaggtcactgcctggaatggccctgaaaccgagagtgag
aatgaatttaggcctttggatggacggatcgatgagttccaccctaaggccacaaggacc
ctttttatagggaatctggagaagactaccagttaccaacagctccttgacatcttccaa
cgctttggagaaattgtggacattgacattaaaaaagtcaatggtgttcctcaatacgct
tttgtgcagtactctgatattgccagcgtttgcaaagctattaagaagatggatggagag
tatctgggaagcaacaggctcaagctggggtttgggaagagcatgcctacaacatgtgtc
tggctcgatgggttggcgtctaacatcactgaccagtacctcacacgccatttctgccgt
tatggacatgtagttaaggttgtgtttgacagattgaaagggatggctcttgtcttgtac
aacaacactgactttgcacaagcagccgtccgagagaccaaaggatggaaaattggtggt
aacaaaataaaggtggattttgccagtcaagagagtcagatggcgttctatcgctctatg
caggcctcagggcaagacatcagagaaatcagagacatctatgaaatcccaactgaaaga
agagaagaacgtagacctccataccacgagttcacagctgaaagagcttactatgagaat
gttcgcacccctggagtctacccagaagaccccaggcgagactatcctgcccgcagtaga
gaacgttttactgaactggagcattaccagggggatcactttgacccacggttccacgaa
gatcccagggagtacagggactatcgagatcctttcgagcaagacattcgaaaatacacg
tacattcagagagagagagaaagggagcgggaacgttttgaggctgaccgaggcaggtgg
agcccctctcacggacgacgtccgatcactcctgccgtttccccttcgccatcggagcgc
gcccccagagattctgaacgacgggtctacagccagtcctctgagagaagtggcagttgc
agctccctctcaccaccacactttgacaaagctgacaagactccactggaacatggcgcc
aagactgataggttggataaggacacacaaccggccccggctgaacgtggccctggagct
gagaaaagcaaacgtggacggcggaaggagaaagctgacaaagagaagggtgagaagatt
aaattgagaaagggaaaggttcaatctcccagtgtcccacctaccgagacagagttggag
actagccttgaagcgggttttggaaggggaaaggtttcagaccaggacagcatcgagagg
cagcgatataaaggggatagtgatccttctacaaatcagacggcgtcaacatctcgccat
gatcctcttaaaagtgagagacttgacatggtaaaggctgagggtgtagaggtggatgga
aaaagtagatccaagaaacaccaaaaagccgacgtaggaaatgatgggaaagacgtatct
gtagattctgatcgccttgcagcaagaaaaaggcgctttggagatgccagtggaaagacc
atcagacaaaaaaggagtagattggaggatgaagatgggaatcaaattccagattttgga
cctagcactgcagttgatagtgacggcaagctaaaagatccacatcggagagattctcgg
tccaaaaccgaaaggatggtgtttctcagcagtcacaaggaaggacaagattctggggcc
agaggacagggagaaccgtcagaggggcccattgagccggtggacttgaaccgccttcca
gggaacattacatccagaaggtattcccacgagggcagcgtggaccaggagactaaagat
caagaacaacacgccgttttcaaatacggtgcaccgacaacggacaacgacaaaagtgga
aaggaacgggaagagcatgtggatattgacctgtctcagagttaccggaaacaaatggag
caaaatagaaggctccaccaacagctgcaggagtctgacaaatcagagaaacctggaagt
ccactaggtgttgaaactgatgatcttgagccccgaagtcttgtgcatgaagtgggtaaa
ccacctcaagatgtaacggataatttcccatctcataaacttaaaaaactagatcagttt
gacatgcaggatgcaagtagtaagaaggagcgtgtctaccggagacagaaaagtgaggat
cctgagtggaacagcacagcctctctgggattgcagcacttttcccaccatgcagatgat
gaatttgctgatttttcacacctcagggaagttaaagctgaggataaagtacatccagac
ttggagctagcagacaaacgggcgcataccactcaaatatccaagccaagcactcctctg
catggaagtgatgaagaccagcaaaagcgctgggagagccgagtcaagcaagatctgtta
cctgacttgaacttcagcagaagtcttgggaaaaacctgcataatcgtaaacggttggag
tatggaatcggacatgatttggaacctggggaagtacgatctgactcagaagaagacaga
gagaacaaaccgcactctccaatgccctctacatcggtgcctttctcagagaggccaagg
ggtgacagattttcagatcccaagctagccaccctggagaggaacaagttctactccttt
gcacttgagcagaccatcacaccagatacaaaggcgctgttggagcgtgctaaatgcctg
tcctcctcaagggaagataactggtctttcttggactatgattctcactttgcgggtttg
cgtagccaaaaagatattgagaaggtggaaccaacaccacgacctacaccttcttggtac
atgaagaaaaagaaaattcgcagtgggtctgaagacaaagtagatgatagaaaggaagaa
cctaagccagaagagcacgaacgcagggagttgtttgcttcccgtttccttcacagctca
atctttgagcaggattctagacgcctgcagcacctagaaagaaggcatgaggacccagag
catggccagagccaacaaactggtcaacaaggcacggcagacacacagccagactctgag
ccagttgtcctgttccatagtcggtttttggagcttacacgactgcagcaacaaaagggg
aaggaccaactgcaacaagaagttaaaaggggaaatcttgtcgatgagaataaaactgaa
aaaccaattgatcaagaaccgcaacctctgcaggtacctaaagtggcagagccccttttg
gagccagatatcaaacctgttagccctgcagaggagccgccccttgtgctcaatttaggc
gtttcacttgcacctaaggagatgtctccacaagatgaaaaacgtgtcattagaagtcca
tctccagatatattaccagtatctatggttaaggaagagaacaaatacaacaaacaacaa
tcgtcaaccccaccctacccacaagttgagattccacctcctgcagctgagggtgttgta
gcccctgagccagctcctccaccaggcaaatttaaatcctcaccaagtgaggagaaatct
gaagatgtgactccagttgtaaaatcccttatggttgaatcgccctgtgacattgatggt
ggtactcaagaagcgtcagtaagcggttctgaaccagagctagagccaggacttgagcaa
gccacatctgaactaactgaactgaaagttccttcacttcctgacactgctgaggagatg
gatgtttcgaagtcttacactgtcaaaacagaaacccactctgatacggaaaataaactt
gatcaagataaaatgcctgtttacgttgaagcaagcgaagaaccagtctcgcctcctcag
aagactaaaaacaaaaagagtaagtcctcccctattcaagttgctcctgctccctttacc
tctgtatctagtactgagaaacctgtcacacgaaagagtgaacgcattgataaagaaaag
ctcaaacgagcatcatcaccaagaggagagtcttcaaagatcagttctgactctaaatcc
acagccaagtctccaatccacggagcagactgtgagcaaggctcagagcagagtatatca
actggacgagcaaggcgtagaaatgttaaatctgtctatgcaaccccacttgacgatgag
acacgaacaggaaaggacgcgtcggagtcaccacgttctgcacggaaacgtggtggtgat
aaggatgcaccaccgcagcaaaatgaagagcaggattcccttgttccgaacacctcgaaa
aggggacgtccgcccaagaatcgaagacaggggtatgacgcttcttcaagaaaaggtgat
agatcaaaaatggacaccaaagacattgactcaaatgaatcagagagtggggaaaaaatc
cctaaagcctcgaaaggtcgtcattctccatatgcctacaaagggtcaggtcaagtagcc
caatccggaagcagtaaaggagaaaaatcagatattcctgatgatgttcaacagcagaca
gatatttccgaggatgacagtttggctccacaagatcctttggtgtctaaagacaattca
tctctacacgatgtgacaaagaaagaagagaaagtcaagcaactggtaacagataaaaag
gatcaagacaagaataacccacctgaagacgaggcgtttggatctgtatcaagtgagaaa
ggggtcgaggccctagttatagatgaacagccctctttggaagacaagaaaactgttaga
ggaaaatctgccaagttgacacggaccccaaagtctccagttctcaagaacttaaaaatt
agactgaatgtcacagaggtgaaagatttactgcagttaggagatgacgaggcaggaaac
caagacgattacttaaaaaagaccaaaccaagcgactcaaatgaccagcttctagagtgt
agtcagagtaaggaagagagtcccagtaatgaggacaatgaagaggaaatgccagatgct
cagcctcccttggatccctctcaagaactagagctggtccaagctgtggagaacattgct
aaacttacaggtccaaccctacctacagacccacacccccccactccaccagtccccgct
acagaagtgaaatgtgacacggaaaaaccaaacaatcctgccagtgagaacgaactaatg
gctgccattgattcgattactgccgaggaggcaactgttcctttggctcaagatccagtg
attgctcctgctgctgtagagtcagattcggaaatgaatgcctccttccagccagtcaag
ggaatcgaaccaacaatacaaacatcctcttctccgggtgaggctcctttccctagtacg
cccaagaaaaatttaaaggggcgagcaaaaacacccaaacggccaaaaagccaaaagcca
agcaaaaaggaacccagcaaagagagcttgtcagaacctgagagctcctccatcgcaaca
tctgacagcacatcctccaacactcagaccatagtagaatgtcattcgtcatctgctggt
gtcattacagccacgtcttggaagccagaacccgaaccattggttgccaaggttgcagat
gggacagctgaatcaaaagtattacctgtagaaccacctcaacatatcaaacccgtctac
ccttctactaaaagtcctaactgtcccaaacctcaacaaccaccccctgagtgcatctca
ccctcgttgtctccaccccctagccgaccaagtgtcaggcctctacagccaagtaggatc
ccagtttccccaccagattggtgcagccagtcaaaagacataggattcctatctgcagtg
ctaccaggcccctttgaaaatcagtcgcctccctctgaccatgaaggcttggatcctgat
cataacacaagtgacttaagacgcattctaattaaaaataaaaatgtttcacttccagga
atcggttccctttctggcaatttggcaatccccacccctaataatccacacatatctgaa
aacactactcaaccaactacactggttgctgtgccaaataaaatcccactatctgaaagt
agactaccaactcatccagctcagcctatagtccgaccccctgcctccctaccatctcct
gagacaaagtcagttgtatctgtcattgcgtccactgccacttctgtcatcagccgtgtt
tgcaatcctcctgatttggaagaaaaggggaatgccactggagcaaatcccggtatggaa
atgcaacttcccaaaccgacctaccgatccagcatggaggatggtggttcctaccatggc
ccatcagtcggtgaggaggggggaagcgctgggcgttttttggttgagagctctactctt
agtactggatcaaacccagggctaagagtgaacacctcagaaggtgtggtagttttgagt
cactctgggcaaaaaagggaaggccctcttcgcctctttgcgaaaataagccagatccca
cctgcaacggcagttgacatggaatctcagcagcttgtatcaatgccccaaataaaacag
gaaatgtatacccacccacagtcaagcactcccaagtgtcctccaacgtcagcagaccat
ggtcacccggctaagacacagcaggccgtgtcctccataaaacaagaaaacacaggtttg
gaaaagatggagtctcactaccagcctgggactcaaggaggagttgtaaagcggcttcag
caagcagttggaggccaacaggtgattggataccatcattcagactttaccatgttgcta
aagcatccaaagaaagtagaaggagcagatgcactgaattctgatggggggaagctgtct
tggacgtctgccataagtccagcaataagccctcacttgccctcgcctgctggcaaccac
gttggctttgtctctgccacagctggtgaccgaactccctctcatctcagtggcgtgaaa
caggagccccgttctccacggaagtcagcccaccctcattctccgttctcgtctcagata
gggtcctcttcccccaaaggtatcccagtgatgttaacctcaggcctgccaaccatgcag
cagtatgtcaccagtgtccaccacccagagcagtcggtgatcatgcctcctcacagcgct
catggtgccttgggaaggatgtctccccaccgtggagcccaaaatattcccatggcgcat
cttgtccagggggaagtgagggtgaacaccccgcccctttctgcaatgagttttggtatc
catggagaaccccttgcctctccatggtcaggcccgatgcagcagcggcccacctccccc
cagaccgtcggcagagacatggtgctcaaggtaaacccgggcaccgtgaggagccatgac
ggagagcaagaggatcctaggcgctttcatccggctgctgggaggccatctgccactcaa
gtgaaaccagagactatgcagccagatccccgtgcagctctgcgcagcggcatgcagatg
gaccagtacatcacgtcacccagggacgtgcgtgtagtcatgcatcacccacaaggagag
cgcgccggcccagagccgcacgcggggggacacgttcaggaaacactcccgccttcctca
acctccagcagcattgcctcgtccatgtctccaagagctcacctgctgtctaaaggcgtg
tcggagaaggatggaccaaagccgctcgaagctaaaaggccacactctcccagcaaggat
gggatgatggggattcgaacccctgtgtcagctatagcatctcctcaacgggttcaacta
atggcgtcaggtacaggaagctcctttccagaatactccaccatctacagcaacccgagg
ggcatccattctcaagtcactgagtcatctactgtagggatccaagcacctgtcaacata
acatcagctctgggtggggagcatagccaggcacaaactggacaccagcctgtcaacatg
gtgcaacttcttacgaagtacccaattgtatggcaaggcctgttggcgctgaaaaatgac
acagctgctgtccaactgcatttcgtctgtggcaacaaagccttggctgtgcggtcactg
ccaccaccactgccagagggaggccagttgctccgaattgtccagaggatgagactagag
gcctctcaacttgaaggagtagcaagaagaatgacgggggagagtgagttctgtctcctc
cttgctctgccatgtggacgagaccaggatgatgtcctgaaccagacccagaccctgaaa
gccgccttcatcaactacctgcaagccaagttagctgctggtatcatcaatgttcccaac
cccggctccaatcagcctgcctacgtgttgcagatcttcccaccttgcgagttttcagag
agccacttgtcccggctagctcccgatctcctaaaccggatctctagtatctccccgcac
ctcatgattgtcatcacaaccgtttaa
DBGET
integrated database retrieval system
