KEGG   Osmerus eperlanus (European smelt): 134031019
Entry
134031019         CDS       T10927                                 
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3
  KO
K05411  interferon regulatory factor 3
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04620  Toll-like receptor signaling pathway
oep04621  NOD-like receptor signaling pathway
oep04622  RIG-I-like receptor signaling pathway
oep04623  Cytosolic DNA-sensing pathway
oep05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oep00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    134031019 (irf3)
   04621 NOD-like receptor signaling pathway
    134031019 (irf3)
   04622 RIG-I-like receptor signaling pathway
    134031019 (irf3)
   04623 Cytosolic DNA-sensing pathway
    134031019 (irf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134031019 (irf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oep03000]
    134031019 (irf3)
   04131 Membrane trafficking [BR:oep04131]
    134031019 (irf3)
Transcription factors [BR:oep03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    134031019 (irf3)
Membrane trafficking [BR:oep04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    134031019 (irf3)
SSDB
Motif
Pfam: IRF-3 IRF SAMP
Other DBs
NCBI-GeneID: 134031019
NCBI-ProteinID: XP_062330468
LinkDB
Position
12:17503902..17509994
AA seq 448 aa
MSQSKPLLIPWLRKQIDSGQYPGVGWTNQERTEFCIPWKHALRQDSSSADVLIFKAWAEA
SSGKAQGDASIWKRNFRAALRAKGFQNICDNKNDAANPHRVFRWPGDAPAGGSQEPAEAD
LYQEPPLDGGPEGPRVYAVYLPQETFTGGDSPNEEPDLLERCLNGLNIVEPPEDGQNDQI
FEEFPGQQPYPETMGAEGGVGLPGQPAYPMGEVVGLASEEAMVTQLVSSMSSTMEDHFKT
QFKVSVYFRGQKVSEQLVENDAGFRLVYRPELTRPVRDPLSGLHLVSLPTVGPMVDHNQA
RLTQTILENMGDGLEVGVTGSVIYGWRRGESRVFWSLCKFDHSRTPQEVSKREPQQLYLA
KDFFWGLHQFIIHGGGDSPPISVFLCLGEKWPDPDTRPWEKKLVTVEVVFTSLEMLKEMA
VRGGASSLQSVELQLSLQESLQELMELC
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtctcagtccaaacctctgctcatcccgtggctgagaaagcagatcgatagtgggcag
tacccaggtgttggctggacaaatcaggaacggacggagttctgcatcccgtggaagcac
gcgctcagacaggactcctcgagcgccgacgttctcatattcaaggcgtgggcggaggcc
agtagtggcaaggctcagggagacgcctctatctggaagaggaacttccgcgccgcgctg
cgagccaagggcttccagaacatctgcgacaacaagaacgacgcagccaacccccacaga
gtgttccgctggccgggcgacgccccggcagggggttctcaggagcctgcggaagcagac
ctgtaccaggagccccctctggatggaggtccagagggaccgcgggtctatgctgtttac
cttccgcaggagacgtttacagggggagattcacccaatgaggagccagatctcctggag
cgctgcctgaatgggttaaacatcgtagaacccccagaagatggacaaaatgatcagatt
tttgaagagtttccagggcaacagccatatccagaaacaatgggagctgagggaggagtt
gggttgccgggacaacctgcttacccaatgggtgaagtggtgggcttggccagtgaggaa
gcgatggtgactcagctggtcagcagcatgtccagcaccatggaagatcatttcaagacc
cagttcaaggtgtctgtgtacttcagagggcagaaggtgtctgagcagctggtggagaac
gatgccggcttcagactggtctaccggcctgagctgacccggcccgtgcgggaccccctg
tcggggctgcacctggtgtccctgcccacggtcgggcccatggtggaccacaaccaggcc
cggttgacccagaccatcctggaaaacatgggggacgggctggaggtgggggtgacaggc
tcagtcatatacggctggcggaggggggagagcagggtgttctggagcctgtgtaagttc
gaccacagccggacgccacaagaggtgtccaagagggagccccagcaactgtacctggcc
aaggacttcttctggggactgcatcagttcatcatccacggcggaggtgattccccccct
atctctgtgttcctgtgtctgggagagaagtggcccgacccagacacaaggccctgggag
aagaagctggtgactgtggaggtggtgttcacgtctctggagatgctgaaggagatggcc
gtcaggggtggcgcctcctctctgcagtcggtggaactgcagctgtctctgcaggagtct
ctacaggagcttatggagttgtgttga

DBGET integrated database retrieval system