Osmerus eperlanus (European smelt): 134031021
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Entry
134031021 CDS
T10927
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
134031021 (lgi1b)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
134031021
NCBI-ProteinID:
XP_062330474
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Position
12:complement(13411704..13421151)
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AA seq
543 aa
AA seq
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MGYANRAVKGCAVFLWVATVVLLAESRRVKQPRCPASCTCSKDNALCVNIRSVPHSFPTD
VFSLSFVNSGFNEITGGSFVYTPAIRLLLFSANSFDLIDEDAFLGLPHLEYLFIENNKIE
SISPFAFRGLKALIHLSLASNNLETLPKDIFKGLDALSNVDLRGNSLVCDCKLKWLVEWM
HSTNATVYTIYCSGPSVYQGKKINDLLPQSFDCIAADFASYQSLKFESISVEDFTFGNDQ
YVVFAQPFTGTCSFQEWDHVEMVFRTFDSIESTSTVVCKPMVIDNQLFVIVAQLFAGSHI
YKRDTSANKFIKIQDIDILKIRKPNDIETFLIDGESFFVIADSSKAGSTTVYKWNGNGFY
SHQSLHPWYRDTDVEYLEISTKPHLILSSSSQRPVVYQWNKALKQFDRRTDIPEMEDVFA
VKHFQVKGDLFICLTRFIGDSKVMRWDGAMFKEVQTVPSRGSMVFQPVAVGNWQYAILGS
DYSLTQVYQWDVKSGLFVHAQELNIQSPRAFSLLSIDNREFLLASSFKGKSQIYEHLMID
LSN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgcaaacagagccgtgaaaggatgtgcggtgtttctgtgggtcgccaccgtc
gttctcttagcggagagcagaagagtgaagcaacccagatgtcctgcatcttgtacctgt
tctaaagataatgccctgtgcgtgaatatccgatccgtcccacacagtttcccaaccgac
gtcttctcattgtcttttgtcaactcaggcttcaatgaaatcacaggtggtagcttcgtt
tacacaccggccattcggcttctcttattcagtgctaattcatttgacttaattgatgaa
gatgccttcctaggtctgccccacctagagtacctgttcatcgaaaacaacaagatagaa
tctatctccccgtttgctttccgaggcctgaaagccctgatacatctgagcctagcttcc
aataacctagaaacattgcccaaagacattttcaagggtttggatgccttgtctaacgtg
gatctgcgggggaacagcctggtatgtgactgcaagctgaagtggctggttgaatggatg
cacagcaccaatgccaccgtgtatacgatctactgcagtggtccctctgtctaccagggc
aagaagatcaatgatctcctgcctcagtccttcgactgcatcgcagcagattttgcctcc
tatcagtccctgaagtttgaatccatctccgtagaggactttacctttggcaacgatcaa
tatgttgtgtttgcccaaccattcactggaacatgcagctttcaggaatgggaccatgtt
gaaatggtctttcgaacctttgatagtattgaaagcacctctaccgtggtgtgtaaaccc
atggtgatcgacaaccagctgttcgtcatcgtggcccagctgttcgctggctcccacatc
tacaagcgtgacactagcgccaataagttcataaagatacaagacatagacatcctgaag
atccggaagcccaatgacattgagacgttcctcattgatggcgagtccttctttgttata
gccgacagctccaaggccggttccaccaccgtgtacaagtggaacggtaatgggttctac
tctcaccagtctctccacccatggtaccgggacacagatgtggagtacctggagatctcc
accaagccccacctgatcctctccagcagctcccagaggcctgtggtctaccagtggaac
aaggccctgaagcagtttgaccgacgaaccgacattcctgagatggaggacgtcttcgcc
gtcaagcactttcaggtcaaaggcgacctcttcatctgcctcacccgcttcatcggtgac
tcaaaggtgatgcgctgggatggcgccatgttcaaggaggtccagacggtgccttcaaga
ggctccatggtgttccagccagtcgccgtgggcaactggcaatacgccatcttgggcagc
gactactcgctgacgcaggtgtaccagtgggatgtcaagagtggcctgttcgttcacgcc
caggagctcaacattcaatcacctagagctttctctttgctgtccatcgacaacagggag
ttcctcctagcttccagcttcaaagggaaatctcagatctatgagcaccttatgatagac
ctgagtaattga
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