Osmerus eperlanus (European smelt): 134033006
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Entry
134033006 CDS
T10927
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04120
Ubiquitin mediated proteolysis
oep04210
Apoptosis
oep04217
Necroptosis
oep04510
Focal adhesion
oep04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134033006 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134033006 (xiap)
04217 Necroptosis
134033006 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134033006 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134033006 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134033006 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134033006 (xiap)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134033006 (xiap)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134033006 (xiap)
Peptidases and inhibitors [BR:
oep01002
]
Peptidase inhibitors
Family I32: IAP family
134033006 (xiap)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134033006 (xiap)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134033006 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
134033006
NCBI-ProteinID:
XP_062333094
LinkDB
All DBs
Position
13:5725265..5730708
Genome browser
AA seq
462 aa
AA seq
DB search
MSGLRGDSDLEADHSIDWSMMDSRLDSFRGSTLAQQVSVERLARAGFYFTGHADRVRCFS
CQKTVENWCGGDTPIERHLEVSPTCKFLSCTYRYNVPALTNGSPYNEEAEDREFRLRTGE
VVDESTYPIAPQMSSEDCRLRTFDAWRSETPVRPRELAQAGFYSTGESDRVLCFCCGGML
SGWEAGDTAWGEHSKYFPNCYFILGHDVGNVPSQGAAEEEGVSRGRTGPQVPMESFEERL
GSFACIQVAVDPERLARAGFYSTGAPDKVSCFRCGGGLKGWQPEEDPWEEHAKHYPGCSF
LLAEKGPEFVNNVQLQSPQRNTASRHHNGFSSHGHDPQVLLSPMAQKALEMGLEGCLVER
TILGQIQKTGDGYSTLEALLHDCFKRAPDSELPVSNEQEGDDPLEKLRKLQREKQCKVCM
DRDTCIVFIPCGHLVTCKECSESLSKCPICCGTITQKIKTYS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcctcagaggagatagtgacctggaggcagaccactccattgactggtccatg
atggactctcgtctggactcgttccgcggttccaccttggcccagcaggtgtcagtagag
aggctggcccgggccgggttctactttacgggccacgccgaccgggtccgctgcttcagc
tgccagaagacggtggagaactggtgtggcggggacactcccatcgagaggcacctggag
gtttccccgacctgcaagttccttagctgtacctaccgatacaacgtcccggcgctcacc
aacggctccccctacaacgaggaggcggaggacagggagttccgcctgcggacgggagag
gtggtggacgagtccacgtaccccatagccccccaaatgagcagcgaagactgccgcttg
aggaccttcgacgcgtggcgctccgagaccccagtgaggccgcgcgagttggcccaggcc
ggcttctacagcaccggggagagcgacagggtgctgtgcttctgctgtggaggcatgctg
tcgggctgggaggctggggacacggcctggggggagcactccaagtacttccccaactgc
tacttcatcctggggcacgatgtggggaacgtgccctcccagggcgctgcagaggaggag
ggggtgagcagggggcgcactgggccccaagtccccatggagagctttgaggagaggctg
ggcagcttcgcctgcatccaggtcgccgttgacccggagaggctggccagagcaggcttc
tacagcacaggagctccagacaaagtgtcatgtttccgctgtggaggcggtctgaagggc
tggcagccagaggaggatccttgggaggagcatgcgaaacattaccctgggtgcagcttc
cttctggcggagaaaggaccggagtttgtcaacaatgttcaactacaatccccacaaagg
aacactgcatcacgccatcacaatggattttcaagccatggccacgatccccaggtgctg
ctgtcacccatggcccagaaggcactggagatgggcctggagggttgtctggtggagaga
accatcctggggcagatccagaagactggagatggctatagcaccctggaggccctgcta
catgactgctttaagcgcgccccagacagcgaattaccggtgtccaacgaacaagaaggt
gacgaccccctcgagaaactacggaagctgcagagggaaaaacagtgcaaagtgtgcatg
gacagagacacatgcatcgtcttcatcccctgcgggcacctcgtcacctgcaaggagtgc
tcagagtccctcagcaagtgtcccatctgctgcgggaccatcactcaaaagatcaagacc
tactcctaa
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