Osmerus eperlanus (European smelt): 134034067
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Entry
134034067 CDS
T10927
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134034067 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134034067 (kdm2aa)
04121 Ubiquitin system [BR:
oep04121
]
134034067 (kdm2aa)
03036 Chromosome and associated proteins [BR:
oep03036
]
134034067 (kdm2aa)
Enzymes [BR:
oep01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
134034067 (kdm2aa)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
134034067 (kdm2aa)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134034067 (kdm2aa)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134034067 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
134034067 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
134034067
NCBI-ProteinID:
XP_062334379
LinkDB
All DBs
Position
14:complement(14685316..14699055)
Genome browser
AA seq
1361 aa
AA seq
DB search
MESGGEFVLQRGDGVMWEEKEQSWEKMDKEGKRRWKGDVMVTLKRSGTRRRYHDDGISDE
EIDGKRTFDLEEKLSSSRFSSDRVKRMEGKDLTFEYIQRGGLRDPIIFEKPDGLGIKMPD
PDFSVNDVKIYVGSRRMIDVMDVSTQKGIEMSMAQWRRYYETPPSQRDKLYNVISLEFSH
TKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSITDMQYPKVQKYCLMSVQGCFTD
FHIDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDMFLGDKATDCQRIEL
KQGYTFIIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLNISSIEDRTRVPSKFRYPFYF
EMCWYVLERYLFSLTNTSYLTPEFQKHSLGIGLKRESCSSESVNGHTKEEEEDHEEEAAA
RPKPGVKVHLTPFELEGLWNLLGKLESLPAHKQCVPAGIHNAPALLHHIRALLKEHASDV
PKLSYTGTPIVQWPKRPSWYQPPPPPPPVVRPKLATTPVTPRPQKPASSMSVLRRRRVRC
KRCEACVRTECGDCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEVCGEGNQEER
GRPVFSLTLMECSNCAQIAHPGCITISGEGVVNKDLPSCWECPKCVQGITDVESSGSDDD
SGGSPGADPLPPQTLSQGPSLGPGLGLRLGLGLGLGAASGLGLVVAPPGCQGLLLRASMT
PHSKRVKGEKSKLLPAKRKSSTLLDARIAKIYRRHRHSREDDDSASDDDDDEDGGEGHRR
KMAVHPRGGGGASRRGYGASRRGLWRGGSSHRGSRGGGVAPNPGLKMRRGLGGRGEGRRG
RGVRLRGGARMQRRRDESEESDDDDDDDDDDDDDDDDDDSEEDHRHAAVRLDKDHRHRRR
RRRRTDDEDDDDDEDEDDSEGRDFEGEDEEELEGLEDEEEEEEDEEGRWDSEPEPPVLLV
SDLNDDLLSGSYLTVTLQRPPRAKRSSASILPKLEAAMATRTPPGFVQRKTLHKTRHKNG
ALVAPGNGLAPPRGVGRPPRHRGNPHSDGERDTASPSSSSSHSSASPTPPHASSSLSPPS
LLSLPSFKDVGNEGGGEKEVWVSVFRYLDRRELSACMTVCKAWYKWSCDKRLWSHLDVSR
CRPLTDQAVAGIIKRQPVSLDLSWTPLSKKQLGRIVHRLPGLRELLLAGCSWWSLAALVT
PSLPCLRLLDLRWAEGVKDAQIRDLLTPPGSESRSRLRGMVELRVSGLEIGDATLRLLLR
HMPQLERLDLAHCRDISDQSICLLTSAGSHTRNTLTHITLTGCTRLTDVCVSYLKRACGL
TLLDLRGCHGVSRRACDAFISDLAHSALYCMTEDKLIQKIS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggaggagagtttgtgctgcagcgaggcgatggagtgatgtgggaggagaag
gagcagagttgggagaagatggacaaagaagggaagcggcgttggaagggggatgtaatg
gtgactctgaagcggtcagggacgcggcgtcgttaccacgacgacgggatctcggacgag
gagatcgatgggaagaggacgttcgacctggaggagaagctgagcagcagccgcttcagc
tcagacagggttaaacgcatggagggcaaagacctgacgtttgagtacatccagagaggt
ggactgagggatcccatcatctttgagaagcctgatggtctgggaatcaagatgcctgat
ccagacttcagtgtgaacgatgtcaagatatatgttggcagcaggcgtatgatagacgtg
atggacgtcagcacccagaagggcatcgagatgtccatggcccagtggaggcgctactac
gagacgccgccctcgcagagagacaagctgtacaacgtcatcagcctggagttcagccac
accaagctggagaacctggtcaagaggcccgcctcggtggacctgatcgactgggtggac
aacatgtggccccgtcacctgaaggagaggcagagggactccaccaactccatcacagac
atgcagtaccccaaagtccagaagtattgtctgatgagtgtgcagggctgcttcacagac
ttccacatcgactttggaggcacctcggtctggtaccacatcctgaggggaggcaaggtg
ttctggctgatcccacccacgcctcagaacctggagctgtatgaaaactgggtgttgtca
gggaaacagggagacatgttcctcggagacaaggccacagactgccagaggattgagttg
aagcagggatacaccttcataatcccctcaggctggatccatgccgtctacaccccagta
gacacgctggtgtttggggggaacttcctccacagtttcaacatccccatgcagctcaac
atcagcagcatcgaggaccggacacgggtaccgtctaagttccgctacccgttctacttt
gagatgtgctggtacgtgttggagaggtacctgttcagcctgaccaacacctcctacctc
accccagagttccagaaacactccttgggcatcgggctgaagagggagtcctgctccagc
gagtcggtgaacggccacaccaaggaggaagaggaggatcacgaggaagaggctgcagct
cgccccaagcccggggtcaaagttcacctgacgccgtttgagctggaagggctgtggaac
ctgctggggaagctggagtctctgccggcgcacaagcagtgtgtccctgcaggcatccac
aacgcccccgccctgctgcaccacatcagggccctgctgaaggaacatgccagcgacgtc
cccaagttgtcctacacaggcacgcccatcgtccagtggcccaagaggccatcctggtac
cagcccccacccccccctcccccggtggtccggcccaaactggccaccacgcccgtgacc
cctcgaccccagaagcccgcctcctccatgtcggtgctgcgccgtcggcgcgtcaggtgt
aagcggtgcgaggcctgtgtgaggaccgagtgtggagactgcaacttctgccgagacatg
aagaagtttggaggaccagggaagctgaagcagacctgcgtactgagacagtgtctggct
cctggcctgcccctgtctgcagtgtgtgaggtgtgtggagaagggaaccaggaggagcga
ggcagacccgtcttctctctcactctcatggagtgttccaactgtgcccagatagcccac
cccggctgcatcacgatctcaggagaaggggtggtgaacaaggacctgccgagctgctgg
gagtgtcccaagtgtgtgcagggaatcacagacgtggagtcgtcgggcagtgatgatgac
agtggtgggtctccgggtgcggatcccctccccccccagactctgtcccaggggccctcg
ctggggccggggctgggcctgagactggggttggggttggggctgggggccgcctcaggc
ctggggctggtggtggcgccccccggctgccaggggctgctactgcgggcctccatgacg
cctcacagcaagagggttaaaggagagaagagcaaactgctgcctgcgaagcggaagtcg
tccaccctcctggatgctcgcatcgccaagatctaccggcgccaccgccacagccgggag
gacgacgactcggccagcgacgatgacgacgatgaggacgggggcgagggccaccgcagg
aagatggccgtccacccccgaggagggggcggggcctcccggcggggctacggtgccagt
cggcggggcttgtggcgcggaggctcctcccaccgcgggtccagaggaggcggagtcgcc
cctaaccccggcctgaagatgaggaggggcctgggggggcggggcgaggggaggcggggg
cggggggtgaggctacggggcggggccaggatgcagaggcgcagggacgagtcggaggag
tcggacgatgacgacgacgatgatgatgacgacgacgatgatgacgatgacgacgacagc
gaggaggaccaccgccacgccgcggtgcggctggacaaagaccaccggcatcgccgccgg
cgacggagacggacggacgacgaggatgacgacgacgacgaggatgaggacgacagcgag
gggcgggactttgaaggcgaggacgaggaggagctggagggcctggaggacgaggaggag
gaggaggaggacgaggagggccgctgggactctgagccggagccgcccgtgctgctggtg
tccgacctgaacgacgacctcctgagcgggtcctacctgaccgtcaccctgcagcggccc
ccgagggccaagcgaagctccgcctccatcctgcccaagctggaggccgccatggcgacc
aggacgccgccgggctttgtccagcgcaaaacgctccacaagacccgccacaagaacggg
gcgctggtcgcccccggcaacggcctggccccgccccggggggtgggccggcccccgcgt
caccgcgggaacccacacagcgacggggagcgggacacggcctcgccctcctcctcgtcc
tcccactcctccgcctcgcccacccctccccacgcctcctcctccctctctcctccctcc
ctcctgtcgctgccctccttcaaggacgtggggaacgagggagggggggagaaggaggtg
tgggtctctgtgttccgctacctggaccgccgggagctgtcggcctgtatgaccgtctgc
aaggcctggtacaagtggagttgtgacaagcgtctatggagtcaccttgacgtgagtcgc
tgccgaccactgacggaccaggcggtggcgggcatcatcaagcgccagcccgtctccctg
gacctgtcctggacaccgctgtccaagaagcagctcggccgcatcgtgcaccgcctgccc
ggtctgagggagctgctgctggctggctgctcctggtggagtctggcggccctggtgacc
cccagcctgccctgcctgaggctgctggacctgcgctgggccgagggggtcaaggacgcc
cagatacgagacctgctcacgccacctggttctgagtcccgtagtcgtctgcggggcatg
gtggagctgcgcgtgtcggggctggagatcggcgacgccacgctgcgcctgctgctccgc
cacatgccccagctggagcgcctggacctggcgcactgccgggacatcagcgaccagtcc
atctgcctgctcacctccgcaggctcgcacacgcgcaacacgctcacgcacatcaccctc
accgggtgcaccaggctgacggacgtgtgcgtgtcgtacctgaagcgtgcgtgcggcctg
acgctgctggacctgaggggttgccacggcgtcagccgcagggcctgcgatgccttcatc
tcagacctggcccacagcgccctctactgcatgaccgaggacaagctcatccagaagatc
tcctag
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integrated database retrieval system
