Osmerus eperlanus (European smelt): 134036330
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Entry
134036330 CDS
T10927
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134036330 (dhx9)
03012 Translation factors [BR:
oep03012
]
134036330 (dhx9)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134036330 (dhx9)
5.6.2.6 RNA 3'-5' helicase
134036330 (dhx9)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134036330 (dhx9)
Translation factors [BR:
oep03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134036330 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
nSTAND3
AAA_14
AAA_19
Motif
Other DBs
NCBI-GeneID:
134036330
NCBI-ProteinID:
XP_062337207
LinkDB
All DBs
Position
16:7773599..7783020
Genome browser
AA seq
1263 aa
AA seq
DB search
MADIKNFLYAWCGKKKVTPDYEVKAAGNKNRQKFLCEVRVDGFSYTGMGNSSNKKDAQSN
AARDFVNYLVRVGEMNGAEVPALGASVPDYSVPDGGGAGADSFGSLPPSGPLPPHLVVKT
EQANHSGPVPGVTGLGYSGGGEHTQCGGGGGGAPWDRGANLKEYYSKRDEMEAQATLESE
EVDLNAGLHGNWTLENAKARLNQFFQKEKNQTDYKYTQVGPDHNRSFIAEMQLFVRQLGR
KVIAREHGSNKKLAAQSCALSIVRQLYHLGVIETYSGIAKKKEGETLEAIEVNVQDDLQN
QLQSLVQDMGVEIPPAPQDSTSPPVSLIQGKMAMFEPSQRQSTAGVVPWSPPQINWNPWT
SSNIDEGPLAFCTPEQISSDLHYQLTEQLEQDVNLQKIIAERDGLPVKKFESEILSVIER
NPVVIIRGATGCGKTTQVPQYILDQFIKNKQASNCNIVVTQPRRISAVSVAERVSYERGE
DVGNSCGYSVRFESILPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFL
MVVLRDVIQAYPEVRIILMSATIDTTMFSEYFLNCPVIEVFGRTFPVQEYFLEDCIQMTR
FIPPMDRKKKEKDDEGGEDETNCNVICGPEYTPETKRSMALMSEKETPFELVEALLKYIE
TLQVAGAVLVFLPGWNLIFSMQRHLEMNPHFRNQRYRILPLHSQIPREEQRRVFEPVPDD
VRKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRA
GRVRAGFCFHICSLARFNKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAIEPPP
LDAVIEAEHTLRELDALDVNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISA
ATCFPEPFISEGKRLAFVHRNYAGTRFSDHVALLSVFQAWDDVRMSGEDAETRFCDHKKL
NMSTLRMTWEAKVQLKDILINSGFPEECLMTQMFNNVGPDNNLDVVISLLTFGSYPNVCY
HKEKRKILTTEGRNALIHKSSVNCPFSNHDMTYPSPFFVFSEKIRTRAISAKGMTLVSPL
QLILFGSKKITSNGEIVELDDWIKLKVPHEVAGSIAALRAAMEALVVEVTKDPEYIRQLD
PTNERLLNLIRQISKPSATGLNLMANNQRFGDGPRPPKMGRFDGGGYQGGGGYRGGDRGY
RGGGYRGGSSGYRGGGSGSYRGGGYGGGGSGGYRGGGYGGGGSGGYRGGGYGGGGYGGNR
GGY
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcggatataaaaaacttcctttatgcctggtgtggtaagaagaaagtaactcctgac
tatgaagttaaagcagctggaaacaaaaacaggcagaagtttttgtgtgaagtccgtgtt
gatggctttagttacactggaatgggcaattccagcaataaaaaggatgcccaatccaat
gctgccagagactttgtcaactaccttgtccgagttggtgaaatgaatggtgcagaggtc
ccagcactgggggcaagcgttcctgactacagtgtgccggatggtggtggagctggtgct
gatagctttggaagtcttcctcccagtggacctttaccacctcatctggtggtgaaaact
gagcaagcaaatcactcaggaccagtccctggcgtgactggtttgggatactctggaggt
ggagaacatacccagtgtggtggtggaggcggaggggctccgtgggaccgtggagccaac
ctgaaggagtactactctaaaagagatgagatggaagcacaggcgactttggagtctgag
gaggttgatctgaacgcgggtctccatggaaactggacccttgagaacgccaaggcccgt
ctgaaccagttctttcagaaggagaagaaccaaactgattacaaatatacccaagtgggg
cctgaccacaacaggagctttatagcagagatgcagttgtttgtgaggcagctgggtaga
aaagtcatagctcgagagcatggttcaaataagaaacttgcggcccagtcctgtgcccta
tcgattgtccgccagctgtaccatctgggtgtgattgagacctacagtgggatagcaaag
aaaaaagagggagaaactttggaggccattgaggttaatgttcaggacgatttgcagaat
cagttgcagagcttggtccaagacatgggtgttgaaattcctccagcacctcaggattcc
acaagtccacccgtgtctctaatccaggggaagatggctatgtttgagccttctcagagg
cagagtacggcaggggtggttccctggtcccccccccagattaactggaacccctggacc
agcagcaacattgatgaaggaccgctggcattttgcacaccagagcagatcagctcagac
cttcactatcagctgaccgagcagctggagcaagatgtcaacctacagaagatcattgcg
gagcgagatggccttccagtgaagaagtttgagtctgaaattttgtccgtcattgagcgc
aacccagtggtcattatccgtggggcgaccggctgtggtaagaccacccaggtgccccag
tacatcctggaccagttcatcaagaacaagcaggcatccaactgtaacattgttgtaact
cagccgaggcgcatcagtgctgtgtctgtggctgagcgcgtgtcttacgagagaggggag
gacgtggggaacagctgtggctacagcgtccgctttgagtccatccttcctcgtccacac
gctagtattcttttctgtactgtcggtgtgctacttcgtaagctagaggcaggcatccga
ggaatcagccatgtgattgttgatgagatccatgagagagacatcaacactgacttcctg
atggtggtcctgagggacgtgatccaggcctacccagaggtacggataatcctcatgtct
gccaccattgacaccaccatgttcagcgaatactttttgaactgccctgtcattgaggtc
ttcggacggacattccctgtacaagagtattttctggaagattgcattcagatgaccaga
ttcattccacccatggatagaaagaagaaagaaaaggatgacgaaggtggagaggatgag
acaaactgcaatgtcatctgtgggcccgaatacacccctgagaccaagcgctccatggcc
ctgatgagtgagaaggagactccgtttgaacttgtggaagccctgctcaagtacatagag
accctgcaggtggctggagctgtgctggttttcctgcctggctggaacctcatcttctcc
atgcagagacacctggaaatgaaccctcacttcaggaaccagcggtacaggattctgccc
ctccactctcagatccccagagaggagcagcgcagggtgtttgagcctgtgcctgatgat
gtcaggaaggtgatcctgtctaccaacattgccgaaaccagtatcacaatcaacgatgtt
gtatatgtcatcgactcctgcaagcagaaagtgaagctgtttacatcccacaacaacatg
accaactacgccaccgtgtgggcgtccaagaccaacctggagcagaggaaggggcgggca
ggacgcgttcgtgctggattctgcttccacatctgtagtcttgcacgctttaacaaactt
gaaacccatatgaccccagagatcttccgcacccctcttcatgaggtggcacttagcatc
aagctactgaggctgggagctatcggccacttcctgtccaaggccatcgagcccccacct
cttgatgctgtcatcgaagccgaacacacgctgagagaactggatgctctagacgtaaac
gatgagctaacaccactcggacgtatcttagcgaagctgcccattgagccaaggcttggg
aagatgatgataatgggatgcatattcaatgttggagatgcagtgtgcaccatctcagct
gccacttgtttcccagagcctttcatcagcgagggcaaacgattggcttttgtgcaccgc
aactacgcaggcaccaggttctctgatcatgtggcactgctgtcagtcttccaggcctgg
gacgatgttagaatgagcggagaagacgccgaaaccagattctgtgaccacaaaaagctc
aacatgtctactctgaggatgacctgggaggccaaggtacagctgaaagatatcctcatc
aactctggattccctgaagaatgtttgatgacccagatgttcaacaacgttggaccagac
aacaacctggacgtggtcatctccctgctgacgtttggctcctaccccaacgtttgctac
cacaaggaaaaaagaaagatcctcaccaccgaggggcgcaatgccctcattcataagtcc
tctgtcaactgtccctttagcaaccatgacatgacctacccctcgcccttctttgtcttt
agcgaaaagatccgaactcgagccatttcggccaaaggaatgacactagtcagccctctg
cagttgatcctgttcggctccaagaagatcacatcaaacggggaaatcgttgaactggat
gattggatcaaactaaaggttcctcatgaggtggcggggagcattgcggctctgagggct
gctatggaggccctggttgttgaagtaaccaaggacccagagtatatccgacagctggac
cccaccaatgagcggctgctcaacctcatccgtcagatctccaagccttctgcgacaggg
cttaacctcatggccaacaaccaacgttttggtgatggcccccgtcctcccaagatgggt
cgttttgatggaggtggttatcaaggaggaggaggctacaggggaggagacagaggttat
cgaggagggggttataggggtggaagtagtgggtacagaggtggtggttctggcagttat
cgaggagggggttatggtggtggtggttctggcggttatcgaggagggggttatggtggt
ggtggttctggcggttatcgaggagggggttatggtggtggtggttatggtggaaacagg
ggtgggtactag
DBGET
integrated database retrieval system
