Osmerus eperlanus (European smelt): 134039288
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Entry
134039288 CDS
T10927
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00780
Biotin metabolism
oep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
134039288 (hlcs)
Enzymes [BR:
oep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
134039288 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
134039288 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
134039288 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
134039288 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
134039288
NCBI-ProteinID:
XP_062341035
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All DBs
Position
19:4928180..4951178
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AA seq
936 aa
AA seq
DB search
MLITLCYVYLWVRFQKCYTVVIRNTLRRLCGSKSTSISNSFTFCALNPPGKSSDLKGQPI
LQHSFNKQLNPPLPEEKVFLKLGDKAIYITEPQACDDLSKWTVLLGSSLVCGPRIENISF
IIEATSGQRVSSQSPLKLKKKVLKWSDYCLPLACSPGQPFRAVAQASVDNFSRLGVAFME
DRLQLDNGLVPSKIVSVLLRESALKELLEKRQPASEKHCISLNNPQTENVHSQPSPCGCD
KEKEDIQQTQRKGSLLLPPEIRRCLSERRGSEPLRGTQDLGSDSGREDNRSLGNNHHMET
HGHHLHLSSCHECLEMENSTIQSVKYASAENIPDLPDDYASDLDSGDETLDELEDETKTS
QSKRASASGKPPNVLVYTGGCEWRFGKVYSLLAECIDMDNYVVYPLRPQQALSEPWLEST
TLLVLAEEEPLTPQLQARFLAYLGQGGRVLGLSSSLCPAGLVLVSRADRRGQICRLSFTR
EDTSELELSALASGSAFARDPQGGGEVELWGELTGHGGDKDMVIVRMTHEGDGGEAVLCQ
VHLEMAPDSQEVTSQGFDELKMSNARRYEVLTEILTSLGLSCELTPIPPPSPVYILSTSE
ERRAGFLKWLHTQVDKEGKLKSSKASLKVVSSSDIHCGSQVPEGTLALVTDSPRELNSEQ
FSLQTYIQHLGTTKLGRTLLYAEVTPTTMDLLEGLTLHLPEEMGLIAVAARQTQGRGRGG
NAWLSPPGCAMFTLNVQVALSSRLGQSIPFLQHLASLAVVEAVRTLPGYEDIDLKVKWPN
DIYYGNLMKLGGVLVTSSVMGPSFHLLIGCGINVSNSNPTICINDLVSRHNHECGCSLQA
LSPAQVIGCTLTSLEGLIAAFQQGGPQAVLPIYYKRWIHSGTQVRLWSEDGPEAEVVGLD
DNGFLQVRSREQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgttgtgctacgtctacctctgggtgcgctttcagaagtgctatacggtg
gttattcgtaacaccttgcgcagattgtgcgggagcaaaagcactagcattagcaacagt
ttcacattctgtgccttgaatccaccaggaaagtcgtctgatctgaaaggacaacctatc
ctccaacatagtttcaataagcaactaaatccacctctgcccgaagagaaagtttttctg
aagttgggtgacaaggctatttacataaccgagcctcaggcatgcgatgacctaagcaag
tggactgtgttgttggggtcctctctggtttgtgggccgcggatagagaacatttctttc
atcatagaggctacctctggacagagagtgagcagccagtctcctctcaagctcaaaaag
aaagtattaaagtggtccgactactgtctccctctggcctgtagtccaggccagccattc
agggcggtggctcaggccagcgttgacaacttcagccgcttgggggtggcctttatggaa
gaccgtcttcagctggacaatggacttgtgccttctaaaatagtttctgtccttctcagg
gaatctgcactcaaagaacttctagaaaagcgacaaccagcaagtgagaagcattgcatt
tccctgaacaacccccagacagaaaacgtccactctcaaccctcaccctgcggctgcgac
aaagagaaagaagacatccagcaaacacaaaggaaagggagcctgctcctacccccggag
atccggaggtgcttgagtgaaagacgaggctctgagcccctgagaggaacccaggaccta
ggctctgacagcggccgcgaggacaaccgctccctgggaaacaaccaccacatggagacc
cacggccaccacctccacttgtccagttgccatgagtgcctggagatggagaacagcacc
atccagtcggtcaagtatgcctcggctgagaacatccctgacctgcccgacgattatgcc
agcgatctggacagtggtgatgagaccctggacgagctggaggatgaaaccaagacaagt
cagtcgaagagagccagcgctagcggcaagccgcccaacgtcctagtctatactggcggc
tgcgagtggcgctttgggaaggtgtactctctgttagcagagtgcattgacatggacaac
tacgtggtttatcccctccggccccagcaggccctgagcgagccctggctggagagcacc
accttgctcgtcctggctgaggaagagccgctgactccccagctccaggcccgcttcttg
gcctacctggggcaggggggccgggtcctgggcctctcctcctccttgtgcccggctggg
ctggtgctggtgtccagggcggacaggagaggacagatctgcaggctcagcttcacgagg
gaggacacctcggagctggagctcagcgcgctggctagcgggagtgcgtttgctcgggat
ccccagggtggtggggaggtggagctgtggggggagctgacaggacacggtggggacaag
gacatggtcattgtgaggatgactcacgagggggatggaggagaggctgtcctttgccag
gtccatctggagatggcccccgactctcaggaagtgacatcacaaggctttgacgagctg
aagatgagcaatgcgcggcgatacgaagtcctgacagagatcctcacctcgctgggcttg
agctgtgagctgacccccatcccaccccccagccccgtctacatcctgtccacctctgag
gaacgcagggccggtttcctgaagtggctccacacccaggtggacaaggaggggaagctg
aagtcttccaaggcctccctaaaagtggtgtccagctcagatatccactgtgggagccag
gtccctgaggggaccctggccctggtcacagactcccctcgagagctgaactcagaacag
ttcagcctgcagacctacatccagcacctggggaccaccaagctgggacgcaccctgctg
tacgccgaggtcacccccactaccatggacttgctggaagggttgacgctccacttgcct
gaggaaatggggttaatcgctgtagctgctcgccaaacccagggcagaggacgaggaggg
aacgcgtggctcagtccgccaggctgtgccatgttcaccctgaatgtccaggtggcgctg
agctccaggctgggccagagcatacccttcctacagcatctggcctcgctggcggtggtg
gaggccgttcgcacgctgcctggttatgaggacatcgatttgaaggtgaagtggcccaac
gatatctactacggtaacctaatgaagctaggcggtgtgctggtgacatcatcagtcatg
ggaccatctttccatcttctcattggatgtggcatcaatgtcagcaacagcaaccccacc
atctgcatcaacgacctggtgagcaggcacaaccacgagtgtggctgcagcctgcaggcc
ctcagccctgctcaggtcataggctgcaccctgacctccctggaggggctcatcgctgcc
ttccagcagggagggccccaggcggtgctgcctatctattacaagagatggatacacagt
gggacccaggtgcgcctgtggagtgaggacggtcccgaggctgaggtggtggggctggac
gacaacggcttcctgcaggtgcgctccagggagcagggtgtggtctctgtgcagcccgat
ggcaactctttcgacatgctgaggaacctggtggtcaccaagcaacgctaa
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