Osmerus eperlanus (European smelt): 134039625
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Entry
134039625 CDS
T10927
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134039625 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134039625 (smcr8a)
Membrane trafficking [BR:
oep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134039625 (smcr8a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
134039625
NCBI-ProteinID:
XP_062341592
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All DBs
Position
2:complement(872926..878784)
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AA seq
931 aa
AA seq
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MIGSPDVVAFTKEDEYGDSYPDPWALPDEFSVPLFPHAANSNPWAKTSYAKFTKDFILIS
EFSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDS
RVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSRASE
CLKTGNRRAFARELQRKLRDLEYTRAVLQKEEGLQREAGPQGCYSAHAVEKANELANVEK
SIYEHRDLLRQICSYPRRERRDPHVVTCHKCSSEAEQLADTYSTLTTPPHHDHAAPGGAG
EGQAGEEAGEEEEEEEEEGGKRKPSYIPQLIKAKSAKCFDKRLKNLQELCEQTFYEATVE
LLRDTERSFRGDLCYLHTRRLDRALRRKQQITNFLFEEDLGEDEEDEGGALRPYCAVNHM
ADTNTHTLTHTPPILLCPDPLEMESLDPYPASEVSHALESEPMSGDGRLESSPSDQTLGT
QESSEETKGSFSSERSAEAQGEGSPAGLQTHHPNADLNPDPDLSLDPERESTSDEVDTTP
VEEEAAEGGDQTPCGREGDTFCEGEVVADSVCEAELESLVQMDTACCMSQEGFFYDSSGP
DSVPGLGLRAPLRPPHSLVVNQEPQAMFPLQGDYMVGSPRSESPMVGLELPTGPLGEAVH
RGSVEEGSDCTMSASTGSDRATSPLGYGGVVTLRQRKRAGQGALRFVRQYPFALQALWCL
LSGRTVVVLGAEEGRVRRLVSALALFVPGPGRCGERVQPWLSCPFTLTDLQRWKLIGLQR
MVSPVGSSMLCSLSRYSRYISILDADQKTLRCPPYRGQLLANMADHRTYIRRGSTYFMHV
QSTLTALAAKAFLFTFTHHLHLPISPGEGLEGSEGRRSLFLQDQLGLGEEDSGILLYLSR
LITQQYLEPATGGASAPSFSFNYITSVLYKI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgataggttccccggacgtagtggcgttcactaaagaagatgaatacggggattcttat
cccgacccatgggctctcccagatgagttttcggttccgctcttccctcacgctgctaac
tccaacccatgggccaaaacctcctacgccaagttcaccaaagacttcatcctcatatct
gaattctcggagcaggtgggcccgcagcccctgctcaccatcccggacgacccgaaagta
tgtggcaccttcgacctcaactatttctccctgcggatcatgtcggtggactaccaagcc
tcgttcgtgggccacccgccaggcagcggctacccccggcttagtttcgtggaagactcg
cgggtggtcctcggtgactcgaaggagggggcatttgcttacgtccatcacctaacactg
tacgacctggaagcgagggggttcgtgcgtccgttctgcatggcctacgtctccgcagat
gagaggaaaatcatgctgcagttccaggaactctctttgcggttctcccgagcctccgaa
tgcctgaagaccgggaacagacgagccttcgcccgggaacttcaaaggaaactgcgggac
ctggagtacacccgtgctgtgctccagaaggaggaaggcttgcagagagaggcggggcct
cagggctgttactccgcccacgccgtggagaaggccaatgagctcgccaacgtggagaag
agcatctatgaacaccgagacttgctgcgtcagatctgctcttacccccggcgcgagcgc
cgcgacccccacgtggtcacctgccacaagtgctcctctgaggcagagcagctggccgac
acgtactccaccctcaccacccccccgcaccacgaccacgctgccccggggggggctggc
gagggccaggcgggtgaggaggctggagaggaggaggaggaggaggaggaggaggggggc
aaacgcaagccctcctacatcccccagctgatcaaagccaagtcagccaagtgtttcgac
aagcgtctgaagaacctgcaggagctgtgtgagcagaccttctacgaggccacggtggaa
ctactcagggacactgagaggagtttccggggggatctttgttacctgcacacacgccga
cttgacagagcactccgcaggaaacagcaaatcaccaacttcctgtttgaggaggatctg
ggagaagatgaggaggatgagggcggggctctgaggccgtactgtgctgtgaaccacatg
gcagacaccaacacacacacactcacacacacccctcctatcctgctgtgccctgatccc
ctggagatggagtccctggatccctacccagcctctgaggtgagccatgccctggagagt
gagcccatgtctggggatggtcgtctggagtcttccccctctgaccagaccctggggacc
caggagagctccgaggagactaaaggtagcttcagcagtgagaggagtgcagaggcacaa
ggagagggctcccccgctggcttgcagacacaccaccccaacgctgacctgaaccctgac
cctgacctgagtctcgacccagagagggagagcactagtgacgaggtggacaccaccccc
gttgaagaagaagctgcagaggggggagaccagaccccctgtggcagagagggtgacacg
ttttgtgagggtgaagttgtcgccgactccgtatgtgaggcagaactggagtcgttagtc
cagatggacacagcatgctgcatgtcccaggagggcttcttctacgactcctcaggccca
gattctgtgcctggtcttgggctcagagctcccctccgcccccctcactccctggtggtt
aaccaagagccccaggccatgtttcccctccagggggactacatggtgggctctccccgc
tcagagagtcccatggttgggctggagctgccaactggccctctaggggaagctgtccac
agaggatctgtggaggaaggttccgactgtaccatgagcgcgtcgacgggttccgaccgg
gcgacctcacctctgggctacgggggtgtggtgacgctgcggcagaggaagcgggcgggg
cagggcgccctgcgcttcgtgaggcagtacccgtttgccctgcaggctctgtggtgcctc
ctgagcgggaggactgtggtggtgctaggggcggaggaggggagggtccgcaggctggtg
tccgccctggctctcttcgtccctgggccaggtcgctgcggagagagggtccagccgtgg
ctgtcctgccccttcaccctgactgacctgcagaggtggaaactcattggattgcaaagg
atggtgtctcctgtgggttccagcatgctttgctccctgtcccgctacagtcgctacatc
tccatcctggatgcagaccagaagaccctgcgctgccctccctaccgcggccagctcctc
gccaacatggccgaccaccgcacctacatccgccggggctcaacctacttcatgcacgtc
cagagcacactaaccgcgctggccgccaaggccttcctgtttaccttcacccaccacctc
caccttcccatcagccccggggagggcttggagggctcggagggcaggagaagcctcttc
ctgcaggaccagctgggtctgggggaggaggacagtggaatactgctctacctcagccgg
ctcatcactcagcagtacctagagccagccactgggggcgctagcgcacccagctttagt
tttaactacatcaccagcgttttatacaagatctga
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