KEGG   Olea europaea var. sylvestris (wild olive): 111376150
Entry
111376150         CDS       T05244                                 
Name
(RefSeq) sm-like protein LSM3B isoform X1
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018  RNA degradation
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111376150
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111376150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111376150
   03041 Spliceosome [BR:oeu03041]
    111376150
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111376150
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111376150
Spliceosome [BR:oeu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111376150
 Complex C
  U2 snRNP components
    111376150
SSDB
Motif
Pfam: LSM U6-snRNA_bdg
Other DBs
NCBI-GeneID: 111376150
NCBI-ProteinID: XP_022854861
LinkDB
Position
Unknown
AA seq 100 aa
MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTSVE
IDDETYEEIVRVCLNFMDFLLLLFSFKFLFIIFIHEHIRE
NT seq 303 nt   +upstreamnt  +downstreamnt
atgggaagcgaagaggagagtgcagtgaaggagccattggacctcatccgtctcagtctg
gacgagcgcatttacgtcaagctccgccatgaccgcgagcttcgcggcaagctccatgcc
tatgatcagcatttgaatatgattcttggtgatgttgaagagatagttacatcagttgaa
attgatgatgaaacgtatgaagagattgtccgggtatgcttaaattttatggattttctt
ctgttacttttttccttcaaatttttgtttatcatttttatccatgagcatataagagag
tag

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